CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G069550.1	Barley	cytosol	77.69	77.1
TraesCS1A01G301500.1	Wheat	cytosol	76.92	69.93
TraesCS1B01G311300.1	Wheat	cytosol	76.92	69.93
TraesCS1D01G301200.1	Wheat	cytosol	75.38	68.53
Os05t0480200-01	Rice	cytosol	67.69	65.19
Zm00001d038486_P002	Maize	cytosol	63.85	58.04
EES19112	Sorghum	cytosol	43.85	42.54
OQU78269	Sorghum	cytosol	37.69	38.89
KXG31771	Sorghum	cytosol	42.31	36.67
OQU88584	Sorghum	cytosol	27.69	30.51
EER98090	Sorghum	cytosol	26.15	30.09
EER90722	Sorghum	cytosol	30.0	29.32
OQU82388	Sorghum	cytosol	25.38	25.58
KXG34558	Sorghum	cytosol	23.85	25.2
KXG21303	Sorghum	plastid	25.38	17.19

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EntrezGene:8077008	UniProt:C5YZT7	EnsemblPlants:EES19700	ProteinID:EES19700
ProteinID:EES19700.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454
GO:GO:0047134	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF294	EnsemblPlantsGene:SORBI_3009G174800	SUPFAM:SSF52833	InterPro:Thioredoxin
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001A88EE5	RefSeq:XP_002441270.1	:	:

Description

hypothetical protein

Coordinates

chr9:-:53001115..53002947

Molecular Weight (calculated)

14598.2 Da

IEP (calculated)

4.453

GRAVY (calculated)

-0.314

Length

130 amino acids

Sequence
(BLAST)

001: MGCCGSSAVD DEEHLDYSSG KVTIIPDLKS WEHKLDEANE LGQTVVVKFS ATWCGPCRNA APVYAELSLK HSDLLFVSID VDELPELVTQ FDVRATPTFI
101: FMRDKKEIDK LVGGNHEDLQ KKFDPYCQCQ

Best Arabidopsis Sequence Match ( AT3G08710.2 )
(BLAST)

001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP

Arabidopsis Description

TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.