Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98090 | Sorghum | cytosol | 55.28 | 60.18 |
| OQU88584 | Sorghum | cytosol | 55.28 | 57.63 |
| Zm00001d019035_P001 | Maize | cytosol | 57.72 | 56.35 |
| Os07t0186000-02 | Rice | extracellular | 52.85 | 53.28 |
| TraesCS2A01G243200.1 | Wheat | cytosol, golgi, plastid | 48.78 | 50.85 |
| TraesCS2D01G244400.1 | Wheat | cytosol | 47.15 | 42.65 |
| TraesCS2B01G260500.1 | Wheat | extracellular | 32.52 | 42.11 |
| OQU78269 | Sorghum | cytosol | 38.21 | 37.3 |
| EER90722 | Sorghum | cytosol | 35.77 | 33.08 |
| EES19112 | Sorghum | cytosol | 35.77 | 32.84 |
| KXG31771 | Sorghum | cytosol | 36.59 | 30.0 |
| Os12t0280050-00 | Rice | cytosol | 28.46 | 28.46 |
| OQU82388 | Sorghum | cytosol | 26.02 | 24.81 |
| EES19700 | Sorghum | cytosol | 25.2 | 23.85 |
| KXG21303 | Sorghum | plastid | 24.39 | 15.62 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | UniProt:A0A1B6Q9F3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 | EnsemblPlants:KXG34558 | ProteinID:KXG34558 |
| ProteinID:KXG34558.1 | PFAM:PF00085 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF370 | EnsemblPlantsGene:SORBI_3002G058100 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00081AE8C5 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:5624666..5625956
Molecular Weight (calculated)
13283.9 Da
IEP (calculated)
4.416
GRAVY (calculated)
0.247
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTVIACHT KEEFDAHMAK AYEAGKLVVI DFMSPTCGAC QEIAPVFAEC AKEYPTKGVF LMVDIFELKE VAHSYCIQAA PTFVFIMDDL TLESFVGASP
101: DKLRNTVKEF IDNTSAASAS SSA
101: DKLRNTVKEF IDNTSAASAS SSA
001: MASEEGQVIA CHTVETWNEQ LQKANESKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV LFLKVDTDEL KSVASDWAIQ AMPTFMFLKE GKILDKVVGA
101: KKDELQSTIA KHLA
101: KKDELQSTIA KHLA
Arabidopsis Description
TRX1Thioredoxin H1 [Source:UniProtKB/Swiss-Prot;Acc:P29448]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.