Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G243200.1 | Wheat | cytosol, golgi, plastid | 85.29 | 98.31 |
| TraesCS2B01G260500.1 | Wheat | extracellular | 65.44 | 93.68 |
| Os07t0186000-02 | Rice | extracellular | 64.71 | 72.13 |
| OQU88584 | Sorghum | cytosol | 55.88 | 64.41 |
| Zm00001d007800_P001 | Maize | cytosol | 56.62 | 64.17 |
| Zm00001d019034_P001 | Maize | cytosol, extracellular, mitochondrion | 51.47 | 57.38 |
| EER98090 | Sorghum | cytosol | 39.71 | 47.79 |
| KXG34558 | Sorghum | cytosol | 42.65 | 47.15 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 41.18 | 47.06 |
| Zm00001d019035_P001 | Maize | cytosol | 43.38 | 46.83 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 39.71 | 41.22 |
| Os12t0280050-00 | Rice | cytosol | 34.56 | 38.21 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 30.88 | 37.17 |
| TraesCS1D01G114000.1 | Wheat | cytosol | 34.56 | 35.88 |
| TraesCS1D01G301200.1 | Wheat | cytosol | 27.94 | 26.57 |
| TraesCS2D01G479600.1 | Wheat | cytosol | 25.0 | 24.46 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006662 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 |
| PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF293 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain |
| EnsemblPlantsGene:TraesCS2D01G244400 | EnsemblPlants:TraesCS2D01G244400.1 | TIGR:cd02947 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:274405306..274408352
Molecular Weight (calculated)
14964.1 Da
IEP (calculated)
5.214
GRAVY (calculated)
0.065
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEGAVIA CHTKQEFDTH MANGKDTGKL DYQVRVVEIT LIYPKDYQVI IDFTASWCGP CRVIAPVFAE YAKKFPGAIF LKVDVDELKD VAEAYNVEAM
101: RTFLFIKDGA KVDTVVGGRK DDIHTKIVAL MGSASA
101: RTFLFIKDGA KVDTVVGGRK DDIHTKIVAL MGSASA
001: MASEEGQVIA CHTVETWNEQ LQKANESKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV LFLKVDTDEL KSVASDWAIQ AMPTFMFLKE GKILDKVVGA
101: KKDELQSTIA KHLA
101: KKDELQSTIA KHLA
Arabidopsis Description
TRX1Thioredoxin H1 [Source:UniProtKB/Swiss-Prot;Acc:P29448]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.