Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G301500.1 | Wheat | cytosol | 90.84 | 83.22 |
| TraesCS1B01G311300.1 | Wheat | cytosol | 90.08 | 82.52 |
| TraesCS1D01G301200.1 | Wheat | cytosol | 89.31 | 81.82 |
| EES19700 | Sorghum | cytosol | 77.1 | 77.69 |
| Os05t0480200-01 | Rice | cytosol | 68.7 | 66.67 |
| Zm00001d038486_P002 | Maize | cytosol | 56.49 | 51.75 |
| HORVU1Hr1G024700.4 | Barley | cytosol | 41.98 | 37.67 |
| HORVU1Hr1G075560.1 | Barley | cytosol | 32.82 | 35.25 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 31.3 | 31.3 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 31.3 | 28.28 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 16.79 | 23.66 |
| HORVU2Hr1G107990.1 | Barley | cytosol | 24.43 | 23.19 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | UniProt:A0A287G3P3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:HORVU1Hr1G069550 | EnsemblPlants:HORVU1Hr1G069550.1 | InterPro:IPR013766 |
| PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF294 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000B46B4CB | : |
Description
Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A287G3P3]
Coordinates
chrchr1H:+:486181083..486181962
Molecular Weight (calculated)
14596.2 Da
IEP (calculated)
4.362
GRAVY (calculated)
-0.235
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCGSNPVD DEEHLDYSSG NVTLVTDLKS WEKKLEDATE ADKTLVVKFS AVWCGPCRVA APAYAELSLK HADLVFVSVD VDELPELVTQ FDIRATPTFI
101: FLRDKKEIDK LVGGNQADLQ QKFEPYCRPV N
101: FLRDKKEIDK LVGGNQADLQ QKFEPYCRPV N
001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
Arabidopsis Description
TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.