Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G107210.1 | Barley | cytosol | 60.22 | 42.75 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 60.22 | 38.62 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 43.01 | 34.48 |
| KRH01124 | Soybean | endoplasmic reticulum | 34.41 | 24.06 |
| KRH01123 | Soybean | cytosol | 31.18 | 23.58 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 30.11 | 23.14 |
| HORVU1Hr1G075560.1 | Barley | cytosol | 30.11 | 22.95 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 33.33 | 22.79 |
| AT5G39950.1 | Thale cress | cytosol | 32.26 | 22.56 |
| CDY65333 | Canola | cytosol | 32.26 | 22.56 |
| KRH45834 | Soybean | cytosol, plastid | 29.03 | 22.31 |
| KRG99185 | Soybean | cytosol, plastid | 29.03 | 22.31 |
| KRH40137 | Soybean | endoplasmic reticulum | 31.18 | 22.14 |
| Bra028445.1-P | Field mustard | cytosol | 31.18 | 21.8 |
| CDX67442 | Canola | cytosol | 31.18 | 21.64 |
| Solyc04g005810.2.1 | Tomato | plastid | 30.11 | 21.05 |
| KRH40138 | Soybean | cytosol, plastid | 27.96 | 20.8 |
| Bra040318.1-P | Field mustard | cytosol | 29.03 | 20.77 |
| KRH74754 | Soybean | cytosol | 27.96 | 20.63 |
| KRH69384 | Soybean | cytosol | 27.96 | 20.31 |
| KRH74753 | Soybean | cytosol | 26.88 | 20.16 |
| Solyc05g006870.2.1 | Tomato | cytosol | 29.03 | 20.0 |
| KRH01119 | Soybean | cytosol | 30.11 | 20.0 |
| CDY27290 | Canola | cytosol | 26.88 | 19.53 |
| Bra017898.1-P | Field mustard | cytosol | 26.88 | 19.53 |
| Solyc05g006860.2.1 | Tomato | cytosol | 27.96 | 19.26 |
| PGSC0003DMT400045450 | Potato | cytosol | 27.96 | 19.26 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 27.96 | 19.26 |
| KRH40136 | Soybean | endoplasmic reticulum | 32.26 | 19.11 |
| PGSC0003DMT400003564 | Potato | plastid | 29.03 | 19.01 |
| KRH69383 | Soybean | cytosol | 25.81 | 18.9 |
| CDY30901 | Canola | cytosol | 25.81 | 18.75 |
| Bra027837.1-P | Field mustard | cytosol | 25.81 | 18.75 |
| CDY45144 | Canola | cytosol | 25.81 | 18.75 |
| KRH74748 | Soybean | plastid | 26.88 | 18.12 |
| KRH69387 | Soybean | plastid | 26.88 | 18.12 |
| AT1G59730.1 | Thale cress | cytosol | 24.73 | 17.83 |
| CDY57101 | Canola | cytosol | 31.18 | 17.58 |
| HORVU1Hr1G024700.4 | Barley | cytosol | 26.88 | 17.12 |
| HORVU1Hr1G069550.1 | Barley | cytosol | 23.66 | 16.79 |
| Solyc02g087630.2.1 | Tomato | plastid | 27.96 | 15.38 |
| Solyc05g006850.2.1 | Tomato | cytosol | 21.51 | 14.81 |
| CDY37032 | Canola | cytosol | 29.03 | 14.44 |
| CDY11645 | Canola | cytosol, plastid | 22.58 | 13.91 |
| Bra016258.1-P | Field mustard | cytosol | 22.58 | 13.91 |
| CDY38768 | Canola | cytosol, plastid | 22.58 | 13.91 |
| CDY23543 | Canola | cytosol | 20.43 | 13.57 |
| CDY23544 | Canola | cytosol | 21.51 | 13.51 |
| AT1G69880.1 | Thale cress | plastid | 21.51 | 13.51 |
| Bra003976.1-P | Field mustard | cytosol | 20.43 | 13.48 |
| CDY48387 | Canola | cytosol | 20.43 | 13.48 |
| HORVU2Hr1G107990.1 | Barley | cytosol | 19.35 | 13.04 |
| CDY48388 | Canola | cytosol | 20.43 | 12.93 |
| Bra003977.1-P | Field mustard | cytosol | 20.43 | 12.75 |
| CDY03743 | Canola | extracellular | 10.75 | 11.63 |
| CDY04457 | Canola | cytosol | 9.68 | 9.18 |
| PGSC0003DMT400045460 | Potato | cytosol | 6.45 | 8.82 |
| CDY11641 | Canola | plastid | 13.98 | 6.28 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | UniProt:A0A287TH93 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:HORVU6Hr1G018190 | EnsemblPlants:HORVU6Hr1G018190.1 | InterPro:IPR013766 |
| PFAM:PF00085 | ScanProsite:PS00194 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF243 | SUPFAM:SSF52833 | InterPro:Thioredoxin |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI000B48115F | SEG:seg | : |
Description
No Description!
Coordinates
chrchr6H:+:45278659..45279159
Molecular Weight (calculated)
10452.5 Da
IEP (calculated)
8.501
GRAVY (calculated)
-0.106
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: LSMSILKRCA IDNLKTARYY STVVAVHSKP AWDQHWEAHR NAPSPMVIDF SASWCGPCRF IEPAFKEMAS RFADALSLLG SLTPLPTSQH LNY
001: MASEEGQVIA CHTVETWNEQ LQKANESKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV LFLKVDTDEL KSVASDWAIQ AMPTFMFLKE GKILDKVVGA
101: KKDELQSTIA KHLA
101: KKDELQSTIA KHLA
Arabidopsis Description
TRX1Thioredoxin H1 [Source:UniProtKB/Swiss-Prot;Acc:P29448]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.