CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74754	Soybean	cytosol	93.7	94.44
KRH74753	Soybean	cytosol	77.95	79.84
KRH69384	Soybean	cytosol	80.31	79.69
KRH45834	Soybean	cytosol, plastid	66.14	69.42
KRG99185	Soybean	cytosol, plastid	65.35	68.59
VIT_01s0026g01460.t01	Wine grape	cytosol	63.78	66.94
PGSC0003DMT400045460	Potato	cytosol	33.86	63.24
Solyc05g006830.2.1	Tomato	cytosol, plastid	65.35	61.48
PGSC0003DMT400045450	Potato	cytosol	65.35	61.48
Solyc05g006870.2.1	Tomato	cytosol	63.78	60.0
KRH74748	Soybean	plastid	63.78	58.7
Solyc05g006860.2.1	Tomato	cytosol	60.63	57.04
KRH69387	Soybean	plastid	61.42	56.52
KRH01124	Soybean	endoplasmic reticulum	57.48	54.89
KRH40137	Soybean	endoplasmic reticulum	53.54	51.91
Solyc04g005810.2.1	Tomato	plastid	54.33	51.88
Solyc05g006850.2.1	Tomato	cytosol	53.54	50.37
KRH40138	Soybean	cytosol, plastid	48.82	49.6
KRH01123	Soybean	cytosol	48.03	49.59
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	48.03	49.19
KRH40136	Soybean	endoplasmic reticulum	59.06	47.77
KRH51778	Soybean	endoplasmic reticulum	43.31	47.01
Os07t0190800-01	Rice	cytosol	48.82	44.93
GSMUA_Achr2P17710_001	Banana	cytosol	44.88	44.88
Os03t0800700-01	Rice	plastid	47.24	44.78
KRH61100	Soybean	cytosol	40.16	43.59
KRH76717	Soybean	endoplasmic reticulum, nucleus	40.94	43.33
TraesCS5D01G454800.1	Wheat	cytosol	44.09	42.75
HORVU5Hr1G107210.1	Barley	cytosol	44.09	42.75
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	44.09	42.75
TraesCS5A01G448200.1	Wheat	cytosol	44.09	42.75
Zm00001d034491_P001	Maize	plastid	44.09	42.11
KRH15131	Soybean	cytosol, nucleus	39.37	42.02
AT1G59730.1	Thale cress	cytosol	42.52	41.86
KRH28739	Soybean	cytosol	39.37	41.67
GSMUA_Achr7P16980_001	Banana	cytosol	33.07	40.78
CDY27290	Canola	cytosol	40.94	40.62
EER90722	Sorghum	cytosol	42.52	40.6
Bra027837.1-P	Field mustard	cytosol	40.16	39.84
CDY30901	Canola	cytosol	40.16	39.84
CDY45144	Canola	cytosol	40.16	39.84
Bra017898.1-P	Field mustard	cytosol	40.16	39.84
KRH05879	Soybean	endoplasmic reticulum	37.8	39.02
HORVU5Hr1G107170.1	Barley	cytosol	44.09	38.62
KRH01119	Soybean	cytosol	42.52	38.57
AT1G69880.1	Thale cress	plastid	44.09	37.84
KRH21649	Soybean	cytosol, plastid	37.01	37.6
KRH10686	Soybean	cytosol	36.22	37.1
CDY23543	Canola	cytosol	40.16	36.43
Bra003976.1-P	Field mustard	cytosol	40.16	36.17
CDY48387	Canola	cytosol	40.16	36.17
CDY23544	Canola	cytosol	41.73	35.81
CDY11645	Canola	cytosol, plastid	42.52	35.76
Bra016258.1-P	Field mustard	cytosol	42.52	35.76
CDY38768	Canola	cytosol, plastid	42.52	35.76
Bra003977.1-P	Field mustard	cytosol	41.73	35.57
CDY48388	Canola	cytosol	40.94	35.37
KRH22228	Soybean	cytosol	31.5	32.79
KRH27111	Soybean	nucleus	31.5	31.75
GSMUA_Achr7P12220_001	Banana	cytosol	28.35	31.03
KRH09556	Soybean	cytosol	33.07	30.66
KRH25890	Soybean	nucleus	29.92	30.16
KRH00477	Soybean	cytosol	32.28	29.5
KRH55615	Soybean	cytosol	29.13	29.37
KRH33304	Soybean	cytosol	29.13	29.37
CDY03743	Canola	extracellular	18.9	27.91
KRH64869	Soybean	cytosol	31.5	26.14
HORVU6Hr1G018190.1	Barley	mitochondrion	18.9	25.81
CDY04457	Canola	cytosol	19.68	25.51
KRH40706	Soybean	mitochondrion	31.5	23.67
KRH00940	Soybean	nucleus, plastid	29.92	21.23
KRH40285	Soybean	plastid	29.92	20.99
CDY11641	Canola	plastid	18.9	11.59

Protein Annotations

MapMan:10.6.1	EntrezGene:100817994	Gene3D:3.40.30.10	EMBL:ACUP02000704	EnsemblPlantsGene:GLYMA_02G023000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114
GO:GO:0098869	UniProt:I1JBS4	InterPro:IPR013766	EnsemblPlants:KRH69383	ProteinID:KRH69383	ProteinID:KRH69383.1
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000233745A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2094411..2095403

Molecular Weight (calculated)

14522.7 Da

IEP (calculated)

9.149

GRAVY (calculated)

-0.134

Length

127 amino acids

Sequence
(BLAST)

001: MGAKFSTFEF VEKSSHSSSL ILTFHSTAKW KAHFDVSKET NKLMVIDFTA TWCGPCKYMD PIIKNFAAKY TDVEFIKIDV DELMEVAQAF QVQAMPTFIL
101: IKKGKVVEKV VGAKKEELQK LIDKHRN

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.