CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40138	Soybean	cytosol, plastid	70.73	69.6
KRH40137	Soybean	endoplasmic reticulum	69.92	65.65
KRH01119	Soybean	cytosol	68.29	60.0
KRH01124	Soybean	endoplasmic reticulum	59.35	54.89
HORVU5Hr1G107210.1	Barley	cytosol	55.28	51.91
TraesCS5A01G448200.1	Wheat	cytosol	55.28	51.91
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	55.28	51.91
TraesCS5D01G454800.1	Wheat	cytosol	55.28	51.91
KRH51778	Soybean	endoplasmic reticulum	48.78	51.28
KRH61100	Soybean	cytosol	48.78	51.28
CDY65333	Canola	cytosol	54.47	50.38
Bra028445.1-P	Field mustard	cytosol	53.66	49.62
PGSC0003DMT400003564	Potato	plastid	56.91	49.3
Os03t0800700-01	Rice	plastid	53.66	49.25
CDX67442	Canola	cytosol	53.66	49.25
KRH76717	Soybean	endoplasmic reticulum, nucleus	47.97	49.17
VIT_14s0066g02560.t01	Wine grape	cytosol	53.66	48.53
KRH74754	Soybean	cytosol	49.59	48.41
KRH74753	Soybean	cytosol	48.78	48.39
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	48.78	48.39
AT5G39950.1	Thale cress	cytosol	52.03	48.12
KRH69383	Soybean	cytosol	49.59	48.03
GSMUA_Achr2P17710_001	Banana	cytosol	49.59	48.03
Bra040318.1-P	Field mustard	cytosol	50.41	47.69
KRH69384	Soybean	cytosol	49.59	47.66
Zm00001d034491_P001	Maize	plastid	51.22	47.37
EER90722	Sorghum	cytosol	51.22	47.37
KRH15131	Soybean	cytosol, nucleus	45.53	47.06
HORVU5Hr1G107170.1	Barley	cytosol	55.28	46.9
KRH40136	Soybean	endoplasmic reticulum	58.54	45.86
KRH28739	Soybean	cytosol	44.72	45.83
GSMUA_Achr7P16980_001	Banana	cytosol	38.21	45.63
KRH05879	Soybean	endoplasmic reticulum	43.9	43.9
KRH45834	Soybean	cytosol, plastid	42.28	42.98
Os07t0190800-01	Rice	cytosol	47.97	42.75
KRG99185	Soybean	cytosol, plastid	41.46	42.15
CDY57101	Canola	cytosol	50.41	37.58
KRH74748	Soybean	plastid	41.46	36.96
KRH69387	Soybean	plastid	40.65	36.23
Solyc02g087630.2.1	Tomato	plastid	49.59	36.09
GSMUA_Achr7P12220_001	Banana	cytosol	33.33	35.34
CDY37032	Canola	cytosol	50.41	33.16
KRH10686	Soybean	cytosol	33.33	33.06
KRH21649	Soybean	cytosol, plastid	33.33	32.8
KRH00477	Soybean	cytosol	36.59	32.37
KRH09556	Soybean	cytosol	34.96	31.39
HORVU6Hr1G018190.1	Barley	mitochondrion	23.58	31.18
KRH33304	Soybean	cytosol	29.27	28.57
KRH64869	Soybean	cytosol	34.96	28.1
KRH22228	Soybean	cytosol	27.64	27.87
KRH55615	Soybean	cytosol	28.46	27.78
KRH25890	Soybean	nucleus	28.46	27.78
KRH27111	Soybean	nucleus	27.64	26.98
KRH40706	Soybean	mitochondrion	34.15	24.85
KRH40285	Soybean	plastid	30.89	20.99
KRH00940	Soybean	nucleus, plastid	30.08	20.67

Protein Annotations

MapMan:10.6.1	EntrezGene:100305773	Gene3D:3.40.30.10	EMBL:ACUP02011501	EnsemblPlantsGene:GLYMA_18G255300	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114
GO:GO:0098869	InterPro:IPR013766	UniProt:K7MUQ5	EnsemblPlants:KRH01123	ProteinID:KRH01123	ProteinID:KRH01123.1
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF243	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002958FE4	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:54163994..54165083

Molecular Weight (calculated)

14119.9 Da

IEP (calculated)

5.272

GRAVY (calculated)

-0.250

Length

123 amino acids

Sequence
(BLAST)

001: MGVLFSSTLE EESPDVKAFH SAERWESYLE KIKESPKLVV IYFTASWCGP CKFIAPVFNH MAAEFANADF VKIDVDELSG VAKEFKVEAM PTFVWWKEGK
101: EVERVVGANK DELQNKIKKH YQL

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.