Factsheet for Bra003977.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48388	Canola	cytosol	97.99	99.32
CDY23544	Canola	cytosol	96.64	97.3
Bra003976.1-P	Field mustard	cytosol	75.17	79.43
Bra016258.1-P	Field mustard	cytosol	75.84	74.83
AT1G69880.1	Thale cress	plastid	71.14	71.62
PGSC0003DMT400045460	Potato	cytosol	20.81	45.59
KRH69384	Soybean	cytosol	38.93	45.31
VIT_01s0026g01460.t01	Wine grape	cytosol	36.24	44.63
KRH74753	Soybean	cytosol	36.91	44.35
Bra027837.1-P	Field mustard	cytosol	37.58	43.75
Bra040318.1-P	Field mustard	cytosol	37.58	43.08
KRH74754	Soybean	cytosol	36.24	42.86
Bra017898.1-P	Field mustard	cytosol	36.24	42.19
KRH69383	Soybean	cytosol	35.57	41.73
Solyc05g006870.2.1	Tomato	cytosol	37.58	41.48
Solyc05g006830.2.1	Tomato	cytosol, plastid	37.58	41.48
PGSC0003DMT400045450	Potato	cytosol	36.91	40.74
Solyc05g006860.2.1	Tomato	cytosol	36.24	40.0
Bra036335.1-P	Field mustard	cytosol	30.87	39.32
HORVU5Hr1G107210.1	Barley	cytosol	34.23	38.93
TraesCS5A01G448200.1	Wheat	cytosol	34.23	38.93
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	33.56	38.17
TraesCS5D01G454800.1	Wheat	cytosol	33.56	38.17
Bra014037.1-P	Field mustard	cytosol	30.2	38.14
Bra028445.1-P	Field mustard	cytosol	33.56	37.59
Bra027469.1-P	Field mustard	cytosol	30.87	37.4
KRG99185	Soybean	cytosol, plastid	30.2	37.19
Solyc05g006850.2.1	Tomato	cytosol	33.56	37.04
EER90722	Sorghum	cytosol	32.89	36.84
Solyc04g005810.2.1	Tomato	plastid	32.89	36.84
KRH45834	Soybean	cytosol, plastid	29.53	36.36
Bra036839.1-P	Field mustard	cytosol	27.52	35.96
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	29.53	35.48
Zm00001d034491_P001	Maize	plastid	31.54	35.34
HORVU5Hr1G107170.1	Barley	cytosol	34.23	35.17
Bra012872.1-P	Field mustard	cytosol	26.85	35.09
GSMUA_Achr2P17710_001	Banana	cytosol	29.53	34.65
Os03t0800700-01	Rice	plastid	30.87	34.33
KRH69387	Soybean	plastid	31.54	34.06
Os07t0190800-01	Rice	cytosol	31.54	34.06
Bra025762.1-P	Field mustard	cytosol	26.17	32.77
KRH74748	Soybean	plastid	30.2	32.61
GSMUA_Achr7P16980_001	Banana	cytosol	21.48	31.07
GSMUA_Achr7P12220_001	Banana	cytosol	23.49	30.17
Bra007245.1-P	Field mustard	plastid	27.52	29.29
Bra031769.1-P	Field mustard	cytosol	23.49	27.78
Bra014691.1-P	Field mustard	cytosol, mitochondrion	24.16	26.87
Bra040055.1-P	Field mustard	cytosol	20.81	22.63
HORVU6Hr1G018190.1	Barley	mitochondrion	12.75	20.43
Bra023564.1-P	Field mustard	plastid	25.5	20.32
Bra001346.1-P	Field mustard	cytosol	22.15	20.12
Bra021417.1-P	Field mustard	plastid	24.16	19.78
Bra040596.1-P	Field mustard	plastid	23.49	19.34

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra003977	EnsemblPlants:Bra003977.1	EnsemblPlants:Bra003977.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4CIE4	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF243	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002541966	:	:	:	:	:

Description

AT1G69880 (E=1e-053) ATH8 | ATH8 (thioredoxin H-type 8)

Coordinates

chrA07:-:16076863..16077639

Molecular Weight (calculated)

17141.8 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.427

Length

149 amino acids

Sequence
(BLAST)

001: MGASTSSPTQ RFSLNSLRSR KPHTPGVEEY EISPYKVSPL IVEMKKKNQW KSRFNALKDT DKLLVIEFTA KWCGPCKSLE AKLEELAAKY TNVEFVKIDV
101: DVLKSVWKEY NLHALPTVVF MKRGQEVDRV VGLKLDEIEG KLHKYAYSF

Best Arabidopsis Sequence Match ( AT1G69880.1 )
(BLAST)

001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF

Arabidopsis Description

TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.