Factsheet for Bra040596.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28704	Canola	plastid	94.48	95.0
CDY51539	Canola	plastid	94.48	95.0
Bra021417.1-P	Field mustard	plastid	88.4	87.91
AT3G02730.1	Thale cress	plastid	84.53	85.96
Bra023564.1-P	Field mustard	plastid	70.72	68.45
VIT_04s0023g00740.t01	Wine grape	plastid	55.25	58.14
KRH00940	Soybean	nucleus, plastid	57.46	58.1
KRH40285	Soybean	plastid	58.01	58.01
GSMUA_Achr8P01040_001	Banana	plastid	53.59	54.19
Solyc05g056300.2.1	Tomato	plastid	54.14	53.85
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	53.59	53.3
TraesCS3B01G453600.1	Wheat	plastid	54.14	51.85
TraesCS3A01G418400.1	Wheat	plastid	54.14	51.85
Zm00001d024835_P001	Maize	plastid	51.38	51.67
Os01t0913000-01	Rice	plastid	53.04	51.34
KXG21303	Sorghum	plastid	50.28	47.4
Zm00001d010871_P001	Maize	plastid	52.49	47.26
GSMUA_Achr11P...	Banana	mitochondrion	34.25	38.51
Bra036839.1-P	Field mustard	cytosol	20.99	33.33
Bra012872.1-P	Field mustard	cytosol	20.44	32.46
Bra025762.1-P	Field mustard	cytosol	20.44	31.09
Bra027837.1-P	Field mustard	cytosol	20.44	28.91
Bra036335.1-P	Field mustard	cytosol	17.68	27.35
Bra017898.1-P	Field mustard	cytosol	19.34	27.34
Bra028445.1-P	Field mustard	cytosol	19.34	26.32
Bra014037.1-P	Field mustard	cytosol	17.13	26.27
Bra040318.1-P	Field mustard	cytosol	18.78	26.15
Bra027469.1-P	Field mustard	cytosol	17.68	26.02
Bra016258.1-P	Field mustard	cytosol	20.44	24.5
Bra003976.1-P	Field mustard	cytosol	18.78	24.11
Bra003977.1-P	Field mustard	cytosol	19.34	23.49
Bra040055.1-P	Field mustard	cytosol	17.13	22.63
Bra001346.1-P	Field mustard	cytosol	19.34	21.34
Bra014691.1-P	Field mustard	cytosol, mitochondrion	14.92	20.15
Bra007245.1-P	Field mustard	plastid	14.92	19.29
Bra031769.1-P	Field mustard	cytosol	13.26	19.05

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra040596	EnsemblPlants:Bra040596.1	EnsemblPlants:Bra040596.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4FHL8	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF258	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002547572	:	:	:	:	:

Description

AT3G02730 (E=5e-085) TRXF1, ATF1 | TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator

Coordinates

chrA05:+:23572463..23573314

Molecular Weight (calculated)

19807.1 Da

IEP (calculated)

8.988

GRAVY (calculated)

-0.072

Length

181 amino acids

Sequence
(BLAST)

001: MPLSLRLAPY PTALASTNGG FGPVMKKQCR ISYSGVATTR IGFCSLDYGK RVDSSVVRCS LETVNVSVGQ VTEVDKDTFW PIVKAAGEKI VVLDMYTQWC
101: GPCKVIAPKY KALSEKYEDV VFLKLDCNPE NRPLVKELGL RVVPTFKIFK DNKVVKEVTG AKYDNLVEAI ETARSTGGSS G

Best Arabidopsis Sequence Match ( AT3G02730.1 )
(BLAST)

001: MPLSLRLSPS PTALSPTTGG FGPSRKQCRI PYSGVPTTKI GFCSLDSRKR GDSSVVRCSL ETVNVSVGQV TEVDKDTFWP IVKAAGEKLV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG

Arabidopsis Description

TRXF1TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.