Factsheet for Solyc03g095500.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059108	Potato	cytosol	95.68	95.68
EES19112	Sorghum	cytosol	45.32	47.01
Os05t0169000-01	Rice	cytosol	44.6	46.97
GSMUA_Achr5P27870_001	Banana	cytosol	47.48	46.81
GSMUA_Achr8P01700_001	Banana	cytosol	46.04	46.04
Zm00001d037499_P001	Maize	cytosol	43.88	45.86
Os01t0168200-01	Rice	plasma membrane	43.17	45.8
TraesCS1B01G132600.1	Wheat	cytosol	42.45	45.04
TraesCS1A01G112400.1	Wheat	cytosol	42.45	45.04
TraesCS1D01G114000.1	Wheat	cytosol	42.45	45.04
Solyc09g015820.2.1	Tomato	plastid	49.64	44.81
Bra007245.1-P	Field mustard	plastid	44.6	44.29
Bra014691.1-P	Field mustard	cytosol, mitochondrion	42.45	44.03
CDY70695	Canola	cytosol	43.17	43.48
KXG31771	Sorghum	cytosol	46.76	43.33
CDY27215	Canola	mitochondrion	46.04	42.95
CDX72138	Canola	mitochondrion	46.04	42.95
AT3G56420.2	Thale cress	mitochondrion	47.48	42.86
AT2G40790.1	Thale cress	cytosol	47.48	42.86
Zm00001d039710_P004	Maize	cytosol	43.88	42.36
CDY67121	Canola	mitochondrion	46.04	42.11
CDX67647	Canola	mitochondrion	45.32	41.72
CDY32015	Canola	mitochondrion	45.32	41.72
Solyc02g084710.2.1	Tomato	extracellular	33.81	39.83
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	46.76	39.39
HORVU1Hr1G024700.4	Barley	cytosol	41.01	39.04
Solyc04g080850.2.1	Tomato	extracellular	28.78	32.52
Solyc02g079960.2.1	Tomato	cytosol	28.78	32.0
Solyc05g006830.2.1	Tomato	cytosol, plastid	28.06	28.89
Solyc04g005810.2.1	Tomato	plastid	27.34	28.57
Solyc05g006860.2.1	Tomato	cytosol	27.34	28.15
Solyc03g118560.1.1	Tomato	cytosol	24.46	27.87
Solyc05g006870.2.1	Tomato	cytosol	26.62	27.41
Solyc05g006850.2.1	Tomato	cytosol	25.9	26.67
Solyc02g087630.2.1	Tomato	plastid	27.34	22.49
Solyc05g056300.2.1	Tomato	plastid	25.9	19.78

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006662	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0034599
GO:GO:0045454	GO:GO:0047134	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	UniProt:K4BIX4
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF267
SUPFAM:SSF52833	EnsemblPlantsGene:Solyc03g095500.2	EnsemblPlants:Solyc03g095500.2.1	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI000276784C	:	:	:	:	:

Description

Thioredoxin [Source:UniProtKB/TrEMBL;Acc:K4BIX4]

Coordinates

chr3:+:56621852..56622920

Molecular Weight (calculated)

15478.3 Da

IEP (calculated)

4.713

GRAVY (calculated)

-0.368

Length

139 amino acids

Sequence
(BLAST)

001: MGQCWTKVSS QENNDVPPTF DLAGGNICLV TSMDKWEEKM SEANHTGKIA VVNFSASWCN PCRAAAPGYH ELADKYTSMI FLTVDVDELP ELSTSWDIKA
101: TPTFIFFRDG RQVDKLVGVK NQELQQKLMN LAESTRSPG

Best Arabidopsis Sequence Match ( AT3G08710.2 )
(BLAST)

001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP

Arabidopsis Description

TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.