Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g084710.2.1 | Tomato | extracellular | 38.52 | 39.83 |
| Solyc04g080850.2.1 | Tomato | extracellular | 39.34 | 39.02 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 35.25 | 31.85 |
| Solyc05g006870.2.1 | Tomato | cytosol | 35.25 | 31.85 |
| Solyc05g006860.2.1 | Tomato | cytosol | 34.43 | 31.11 |
| Solyc09g015820.2.1 | Tomato | plastid | 38.52 | 30.52 |
| Solyc04g005810.2.1 | Tomato | plastid | 32.79 | 30.08 |
| Solyc05g006850.2.1 | Tomato | cytosol | 32.79 | 29.63 |
| Solyc02g079960.2.1 | Tomato | cytosol | 27.05 | 26.4 |
| Solyc03g095500.2.1 | Tomato | cytosol | 27.87 | 24.46 |
| Solyc02g087630.2.1 | Tomato | plastid | 31.15 | 22.49 |
| Solyc05g056300.2.1 | Tomato | plastid | 24.59 | 16.48 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 |
| GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | UniProt:K4BM07 |
| PFAM:PF00085 | PIRSF:PIRSF000077 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF489 |
| SUPFAM:SSF52833 | EnsemblPlantsGene:Solyc03g118560.1 | EnsemblPlants:Solyc03g118560.1.1 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI0002765FB0 | : | : | : | : |
Description
Thioredoxin [Source:UniProtKB/TrEMBL;Acc:K4BM07]
Coordinates
chr3:+:67439764..67440244
Molecular Weight (calculated)
13563.0 Da
IEP (calculated)
5.884
GRAVY (calculated)
-0.284
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQDPDSASD LNDGKVVDIH SVTELETKLN AASEASCLAI LYFTATWCGP CRYISPFYTN LPRKYPKVAF LKADVDEARD AASRWNVSSV PSFFFIKNGK
101: EIDKVVSTDK NSLEKKIAQY AG
101: EIDKVVSTDK NSLEKKIAQY AG
001: MVDAIQVAEL RRFVEQLKLN PSILHDPSLV FFKEYLRSLG AQVPKIEKTA ETKPSFSPKH DDDDDDIMES DVELDNSDVV EPDNEPPQPM GDPTAEVTDE
101: NRDDAQSEKS KAMEAISDGR FDEAIEHLTK AVMLNPTSAI LYATRASVFL KVKKPNAAIR DANVALQFNS DSAKGYKSRG MAKAMLGQWE EAAADLHVAS
201: KLDYDEEIGT MLKKVEPNAK RIEEHRRKYQ RLRKEKELQR AERERRKQQE AQEREAQAAL NDGEVISIHS TSELEAKTKA AKKASRLLIL YFTATWCGPC
301: RYMSPLYSNL ATQHSRVVFL KVDIDKANDV AASWNISSVP TFCFIRDGKE VDKVVGADKG SLEQKIAQHS SSK
101: NRDDAQSEKS KAMEAISDGR FDEAIEHLTK AVMLNPTSAI LYATRASVFL KVKKPNAAIR DANVALQFNS DSAKGYKSRG MAKAMLGQWE EAAADLHVAS
201: KLDYDEEIGT MLKKVEPNAK RIEEHRRKYQ RLRKEKELQR AERERRKQQE AQEREAQAAL NDGEVISIHS TSELEAKTKA AKKASRLLIL YFTATWCGPC
301: RYMSPLYSNL ATQHSRVVFL KVDIDKANDV AASWNISSVP TFCFIRDGKE VDKVVGADKG SLEQKIAQHS SSK
Arabidopsis Description
TDXTPR repeat-containing thioredoxin TDX [Source:UniProtKB/Swiss-Prot;Acc:Q8VWG7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.