CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G43670.1	CDY32970	AT5G42980.1	15352244
AT1G43670.1	CDY43592	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005526.1-P	Field mustard	cytosol	87.65	99.3
CDY58803	Canola	cytosol	95.37	91.69
AT1G43670.1	Thale cress	cytosol	94.75	90.03
CDY17136	Canola	cytosol	98.77	89.39
CDY64046	Canola	cytosol	95.37	89.31
KRH35151	Soybean	cytosol	87.35	83.73
Solyc12g056530.1.1	Tomato	plastid	87.65	83.53
PGSC0003DMT400027988	Potato	cytosol	87.65	83.53
KRG91644	Soybean	cytosol	87.35	83.48
VIT_18s0072g00770.t01	Wine grape	cytosol	85.8	82.01
PGSC0003DMT400061951	Potato	cytosol	85.8	81.76
Solyc04g071340.2.1	Tomato	cytosol, nucleus, plastid	85.49	81.47
GSMUA_Achr8P07890_001	Banana	cytosol	85.49	81.23
KRH08703	Soybean	cytosol, nucleus	85.19	80.7
GSMUA_Achr1P17000_001	Banana	cytosol	84.26	80.53
Os01t0866400-01	Rice	cytosol, extracellular, plasma membrane	83.33	79.65
KXG22100	Sorghum	cytosol	83.33	79.18
KXG33753	Sorghum	cytosol	83.33	78.72
Zm00001d042727_P001	Maize	cytosol	83.02	78.43
TraesCS1D01G274000.1	Wheat	cytosol	82.41	78.3
TraesCS1A01G273900.1	Wheat	cytosol	82.41	78.3
TraesCS1B01G283600.1	Wheat	cytosol	82.1	78.01
TraesCS1D01G274200.2	Wheat	cytosol	80.86	76.83
TraesCS3D01G370700.1	Wheat	cytosol	81.48	76.74
HORVU1Hr1G074330.14	Barley	cytosol	81.48	76.74
TraesCS3B01G410400.1	Wheat	golgi	81.48	76.74
TraesCS3A01G377600.1	Wheat	cytosol	81.48	76.74
Zm00001d010172_P004	Maize	cytosol	82.41	71.01
CDY13182	Canola	plastid	50.0	39.42
CDX76171	Canola	plastid	50.0	39.32
CDY60769	Canola	plastid	50.0	39.13
CDY60767	Canola	plastid	50.0	38.94
CDY66557	Canola	plastid	50.0	38.85
CDY07558	Canola	mitochondrion, vacuole	23.15	36.95
GSMUA_Achr5P26140_001	Banana	plastid	45.99	33.79
CDY58267	Canola	plastid	41.36	33.0
CDX84521	Canola	cytosol	40.12	30.02
CDY67108	Canola	cytosol	80.56	29.66
CDX76072	Canola	plastid	26.23	21.57
CDX67626	Canola	plastid	26.23	21.57
CDY02960	Canola	plastid	25.93	21.32
CDY27264	Canola	plastid	25.62	21.12
CDX72200	Canola	plastid	25.62	21.07
CDY63439	Canola	cytosol	17.9	20.57

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:3.1.2.3
MapMan:3.10.3	Gene3D:3.30.540.10	Gene3D:3.40.190.80	GO:A0A078G423	UniProt:A0A078G423	EnsemblPlants:CDY19443
ProteinID:CDY19443	ProteinID:CDY19443.1	InterPro:FBPase_N	InterPro:FBPase_class-1	InterPro:FBPtase	InterPro:Fructose_bisphosphatase_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0042132	GO:GO:0042578	EnsemblPlantsGene:GSBRNA2T00009011001
HAMAP:MF_01855	PFAM:PF00316	PIRSF:PIRSF000904	PIRSF:PIRSF500210	PRINTS:PR00115	ScanProsite:PS00124
PANTHER:PTHR11556	PANTHER:PTHR11556:SF19	MetaCyc:PWY-5484	SUPFAM:SSF56655	UniPathway:UPA00138	UniParc:UPI0004EDCE19

Description

BnaC04g11560DBnaC04g11560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G423]

Coordinates

chrLK032096:+:177779..179703

Molecular Weight (calculated)

35718.5 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.236

Length

324 amino acids

Sequence
(BLAST)

001: MDHEADAYRT DLMTITRFVL NEQSKYPESR GDFTILLSNI VLGCKFVCSA VNKGEEQKKL DVLSNDVFVK ALVSSGRTSV LVSEEDEEAT FVESSKRGKY
101: CVVFDPLDGS SNIDCGVSIG TIFGIYTMEH SDEPTIEDVL KPGNEMVAAG YCMYGSSCML VLSTGTGVHG FTLDPSLGEF ILTHPDIKIP NKGNIYSVNE
201: GNAQNWDGPT TKYVERCKYP KDGSPAKSLR YVGSMVADVH RTLLYGGIFL YPADKKSPNG KLRVLYEVFP MAFLMEQAGG QAFTGKKRAL DLVPKKIHER
301: SPIFLGSYDD VEEIKALYAA EENN

Best Arabidopsis Sequence Match ( AT1G43670.1 )
(BLAST)

001: MDHAADAHRT DLMTITRFVL NEQSKYPESR GDFTILLSHI VLGCKFVCSA VNKAGLAKLI GLAGETNIQG EEQKKLDVLS NDVFVNALVS SGRTSVLVSE
101: EDEEATFVEP SKRGKYCVVF DPLDGSSNID CGVSIGTIFG IYTLDHTDEP TTADVLKPGN EMVAAGYCMY GSSCMLVLST GTGVHGFTLD PSLGEFILTH
201: PDIKIPNKGN IYSVNEGNAQ NWDGPTTKYV EKCKFPKDGS PAKSLRYVGS MVADVHRTLL YGGIFLYPAD KKSPNGKLRV LYEVFPMSFL MEQAGGQAFT
301: GKKRALDLVP EKIHERSPIF LGSYDDVEEI KALYAEEEKK N

Arabidopsis Description

CYFBPFructose-1,6-bisphosphatase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9MA79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.