Factsheet for PGSC0003DMT400061951

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071340.2.1	Tomato	cytosol, nucleus, plastid	99.12	99.12
PGSC0003DMT400027988	Potato	cytosol	95.0	95.0
VIT_18s0072g00770.t01	Wine grape	cytosol	90.88	91.15
GSMUA_Achr8P07890_001	Banana	cytosol	89.41	89.15
Bra005526.1-P	Field mustard	cytosol	74.71	88.81
KRH08703	Soybean	cytosol, nucleus	88.24	87.72
KXG22100	Sorghum	cytosol	87.65	87.39
GSMUA_Achr1P17000_001	Banana	cytosol	86.76	87.02
Os01t0866400-01	Rice	cytosol, extracellular, plasma membrane	86.18	86.43
AT1G43670.1	Thale cress	cytosol	86.47	86.22
CDY58803	Canola	cytosol	85.29	86.05
KXG33753	Sorghum	cytosol	86.76	86.01
CDY19443	Canola	cytosol	81.76	85.8
Bra014005.1-P	Field mustard	cytosol	85.0	85.76
TraesCS1A01G273900.1	Wheat	cytosol	85.59	85.34
TraesCS1D01G274000.1	Wheat	cytosol	85.0	84.75
TraesCS1B01G283600.1	Wheat	cytosol	85.0	84.75
CDY64046	Canola	cytosol	85.59	84.1
Zm00001d042727_P001	Maize	cytosol	84.71	83.97
TraesCS1D01G274200.2	Wheat	cytosol	83.82	83.58
HORVU1Hr1G074330.14	Barley	cytosol	84.41	83.43
TraesCS3A01G377600.1	Wheat	cytosol	84.41	83.43
TraesCS3B01G410400.1	Wheat	golgi	84.41	83.43
TraesCS3D01G370700.1	Wheat	cytosol	84.41	83.43
CDY17136	Canola	cytosol	85.88	81.56
Zm00001d010172_P004	Maize	cytosol	85.88	77.66
PGSC0003DMT400052463	Potato	cytosol	52.06	43.38
PGSC0003DMT400049395	Potato	plastid	51.76	43.14
PGSC0003DMT400049394	Potato	mitochondrion, plastid	46.76	38.88
GSMUA_Achr5P26140_001	Banana	plastid	47.35	36.51
PGSC0003DMT400083786	Potato	plastid	35.88	33.06
CDY67108	Canola	cytosol	70.59	27.27
PGSC0003DMT400069750	Potato	cytosol, extracellular, plastid	26.18	22.53

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:3.1.2.3
MapMan:3.10.3	Gene3D:3.30.540.10	Gene3D:3.40.190.80	ProteinID:CAA54265	ProteinID:CAA54265.1	InterPro:FBPase_N
InterPro:FBPase_class-1	InterPro:FBPtase	InterPro:Fructose_bisphosphatase_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0042132
GO:GO:0042578	GO:GO:0046872	UniProt:M1C8A8	HAMAP:MF_01855	PFAM:PF00316	EnsemblPlantsGene:PGSC0003DMG400024109
PGSC:PGSC0003DMG400024109	EnsemblPlants:PGSC0003DMT400061951	PIRSF:PIRSF000904	PIRSF:PIRSF500210	PRINTS:PR00115	ScanProsite:PS00124
PANTHER:PTHR11556	PANTHER:PTHR11556:SF19	SUPFAM:SSF56655	UniParc:UPI0002961123	EMBL:X76946	SEG:seg

Description

Fructose-1,6-bisphosphatase, cytosolic [Source:PGSC_GENE;Acc:PGSC0003DMG400024109]

Coordinates

chr4:+:59825146..59829212

Molecular Weight (calculated)

37113.5 Da

IEP (calculated)

5.419

GRAVY (calculated)

-0.168

Length

340 amino acids

Sequence
(BLAST)

001: MDHAADAHRT DLMTITRFVL NEQTKHPESR GDFSILLSHI VLGCKFVCTA VNKAGLAKLL GLAGETNVQG EDQKKLDVLS NEVFIKALVS SGRTCILVSE
101: EDEEATFVEP ANRGKYCVVF DPLDGSSNID CGVSIGTIFG IYMIKDGHEP TLDDVLQPGM NMLAAGYCMY GSSCTLVLST GSGVNGFTLD PSLGEFILTH
201: PDIKIPKKGK IYSVNEGNAK NWDGPTSKYV QSCKYPADGS SPKSLRYIGS MVADVHRTLL YGGIFLYPGD KKSPNGKLRV LYEVFPMSFL MEQAGGQAFT
301: GKQRALDLVP EKIHERSPIF LGSYDDVEEI KKLYAAEEQN

Best Arabidopsis Sequence Match ( AT1G43670.1 )
(BLAST)

001: MDHAADAHRT DLMTITRFVL NEQSKYPESR GDFTILLSHI VLGCKFVCSA VNKAGLAKLI GLAGETNIQG EEQKKLDVLS NDVFVNALVS SGRTSVLVSE
101: EDEEATFVEP SKRGKYCVVF DPLDGSSNID CGVSIGTIFG IYTLDHTDEP TTADVLKPGN EMVAAGYCMY GSSCMLVLST GTGVHGFTLD PSLGEFILTH
201: PDIKIPNKGN IYSVNEGNAQ NWDGPTTKYV EKCKFPKDGS PAKSLRYVGS MVADVHRTLL YGGIFLYPAD KKSPNGKLRV LYEVFPMSFL MEQAGGQAFT
301: GKKRALDLVP EKIHERSPIF LGSYDDVEEI KALYAEEEKK N

Arabidopsis Description

CYFBPFructose-1,6-bisphosphatase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9MA79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.