CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G43670.1	CDY32970	AT5G42980.1	15352244
AT1G43670.1	CDY43592	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58803	Canola	cytosol	31.02	81.01
CDY19443	Canola	cytosol	29.66	80.56
CDY64046	Canola	cytosol	31.14	79.19
Bra005526.1-P	Field mustard	cytosol	25.57	78.67
AT1G43670.1	Thale cress	cytosol	30.34	78.3
CDY17136	Canola	cytosol	31.82	78.21
KRG91644	Soybean	cytosol	28.3	73.45
KRH35151	Soybean	cytosol	28.07	73.08
Solyc12g056530.1.1	Tomato	plastid	27.95	72.35
PGSC0003DMT400027988	Potato	cytosol	27.95	72.35
GSMUA_Achr8P07890_001	Banana	cytosol	27.5	70.97
PGSC0003DMT400061951	Potato	cytosol	27.27	70.59
VIT_18s0072g00770.t01	Wine grape	cytosol	27.16	70.5
Solyc04g071340.2.1	Tomato	cytosol, nucleus, plastid	27.16	70.29
KXG22100	Sorghum	cytosol	27.16	70.09
GSMUA_Achr1P17000_001	Banana	cytosol	26.93	69.91
KRH08703	Soybean	cytosol, nucleus	27.16	69.88
Os01t0866400-01	Rice	cytosol, extracellular, plasma membrane	26.82	69.62
Zm00001d042727_P001	Maize	cytosol	26.82	68.8
TraesCS1D01G274000.1	Wheat	cytosol	26.59	68.62
TraesCS1B01G283600.1	Wheat	cytosol	26.59	68.62
TraesCS1A01G273900.1	Wheat	cytosol	26.59	68.62
HORVU1Hr1G074330.14	Barley	cytosol	26.7	68.31
KXG33753	Sorghum	cytosol	26.59	68.22
TraesCS3D01G370700.1	Wheat	cytosol	26.59	68.02
TraesCS3B01G410400.1	Wheat	golgi	26.59	68.02
TraesCS3A01G377600.1	Wheat	cytosol	26.59	68.02
TraesCS1D01G274200.2	Wheat	cytosol	26.25	67.74
Zm00001d010172_P004	Maize	cytosol	26.82	62.77
CDY13182	Canola	plastid	17.27	36.98
CDX76171	Canola	plastid	17.27	36.89
CDY66557	Canola	plastid	17.27	36.45
CDY60769	Canola	plastid	17.05	36.23
CDY60767	Canola	plastid	17.05	36.06
GSMUA_Achr5P26140_001	Banana	plastid	16.36	32.65
CDX84521	Canola	cytosol	14.32	29.1
CDY07558	Canola	mitochondrion, vacuole	6.7	29.06
CDY58267	Canola	plastid	13.41	29.06
CDY27264	Canola	plastid	9.2	20.61
CDX76072	Canola	plastid	9.09	20.3
CDY02960	Canola	plastid	9.09	20.3
CDX67626	Canola	plastid	8.86	19.8
CDX72200	Canola	plastid	8.86	19.8
CDY63439	Canola	cytosol	6.02	18.79

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:3.1.2.3
MapMan:3.10.3	Gene3D:3.30.540.10	Gene3D:3.40.190.80	Gene3D:3.80.10.10	GO:A0A078JHM9	UniProt:A0A078JHM9
InterPro:Aspartic_peptidase_AS	EnsemblPlants:CDY67108	ProteinID:CDY67108	ProteinID:CDY67108.1	InterPro:FBPase_N	InterPro:FBPase_class-1
InterPro:FBPtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005975	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791
GO:GO:0019538	GO:GO:0042132	EnsemblPlantsGene:GSBRNA2T00058849001	InterPro:IPR021109	InterPro:IPR032675	InterPro:LRR_dom_sf
HAMAP:MF_01855	PFAM:PF00316	PFAM:PF13975	PRINTS:PR00115	ScanProsite:PS00141	PANTHER:PTHR11556
PANTHER:PTHR11556:SF19	MetaCyc:PWY-5484	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SUPFAM:SSF52058	SUPFAM:SSF56655
UniPathway:UPA00138	UniParc:UPI0004EE0EE8	SEG:seg	:	:	:

Description

BnaCnng53590DBnaCnng53590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHM9]

Coordinates

chrLK035764:-:1785..7772

Molecular Weight (calculated)

98765.7 Da

IEP (calculated)

8.975

GRAVY (calculated)

-0.322

Length

880 amino acids

Sequence
(BLAST)

001: MKTEIFRPTS KRRSQAGERA RPKFLGAAWQ RPQLNIFERG LLIEVYGDRG VGEFEVMVCS SLPVGKEKRK IKSLAGAIYH MFSGVTCSSR MIMSIPWSSP
101: PFVTLGASQN LSSNTSTALV ERRTFKSKNN RRTPPLLRGV RGLLNVREWR KWGDDVNAII IGRLNDSLRP SVLYKPTVAA APFRYPLIIT GRARKKDGSR
201: RFVLNEQSKY PESRGDFTIL LSNIVLGCKF VCSAVNKAGL AKLIGLAGDT NIQACFYGEE QKKLNVLSND VFVKALVSSG RTSVLVPEED EEATFVESSK
301: RGKYCVVFDP LDGSSNIDCG VSIGTIFGIY TMEHSDEPTT EDVLKPGNEM VAAGYCMYGS SCMLVLSTGT GVNGFTLDPS LGEFILTHPD IKIPKKGNIY
401: SVNEGNAQNW DGPTTKYVER CKYPKDGSPA KSLRYVGSMV ADVHPTLLYG GIFLVQLYKT TPNHGRLKPP YRRLTPEEYA QRKKDDLCFR CDEKYVYPHV
501: CSRKELMVLV VHENGTEIEI SEEQMEHRED EEEEITEVAE LSVNSVVGLS APHTIKLRGT INGEEVVVLI DSGATHNFIS ESLVRRLGLT RGTSRGYGVM
601: VGGGMIVQGK GICEEVQLKC SSLKFLSVDN NNIKDTFPFW LKGLPNLQAF TLRSNRFYGP ISPPGQGPLA FPELRILEIA DNKFTGSFPQ DYFVNWKVMT
701: EDGSLLKTLI ALNLSNNAFT GHIPRSLENV TELESLDLSR NKLSVWLITN SKAKYHKDHN LVGKLNHHLK GIQVYVVFLS KEVALRHHRH NSFEEEDEEE
801: EGVLNWKAVV IRYGPGLLLA HVTASYKLKW YWYLKIVGLD KHKEVKPVNI RESETIRSYR FQEFNLKPYS TGPYPQPSHW

Best Arabidopsis Sequence Match ( AT1G43670.1 )
(BLAST)

001: MDHAADAHRT DLMTITRFVL NEQSKYPESR GDFTILLSHI VLGCKFVCSA VNKAGLAKLI GLAGETNIQG EEQKKLDVLS NDVFVNALVS SGRTSVLVSE
101: EDEEATFVEP SKRGKYCVVF DPLDGSSNID CGVSIGTIFG IYTLDHTDEP TTADVLKPGN EMVAAGYCMY GSSCMLVLST GTGVHGFTLD PSLGEFILTH
201: PDIKIPNKGN IYSVNEGNAQ NWDGPTTKYV EKCKFPKDGS PAKSLRYVGS MVADVHRTLL YGGIFLYPAD KKSPNGKLRV LYEVFPMSFL MEQAGGQAFT
301: GKKRALDLVP EKIHERSPIF LGSYDDVEEI KALYAEEEKK N

Arabidopsis Description

CYFBPFructose-1,6-bisphosphatase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9MA79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.