Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G55800.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT3G55800.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67626 | Canola | plastid | 89.36 | 63.96 |
| CDX72200 | Canola | plastid | 88.65 | 63.45 |
| CDY27264 | Canola | plastid | 88.3 | 63.36 |
| CDX76072 | Canola | plastid | 87.94 | 62.94 |
| CDY02960 | Canola | plastid | 87.59 | 62.69 |
| AT3G55800.1 | Thale cress | plastid | 86.88 | 62.34 |
| Bra003221.1-P | Field mustard | plastid | 65.25 | 58.23 |
| EES01767 | Sorghum | plastid | 76.24 | 56.14 |
| Zm00001d042840_P001 | Maize | plastid | 75.18 | 55.94 |
| PGSC0003DMT400069750 | Potato | cytosol, extracellular, plastid | 78.01 | 55.7 |
| Solyc05g052600.2.1 | Tomato | plastid | 77.66 | 55.58 |
| VIT_13s0019g03350.t01 | Wine grape | extracellular, plastid | 77.31 | 55.47 |
| Os04t0234600-01 | Rice | plastid | 76.6 | 55.1 |
| KRG97781 | Soybean | nucleus, plastid | 75.18 | 54.78 |
| TraesCS3D01G359900.2 | Wheat | plastid, unclear | 76.24 | 54.71 |
| TraesCS3B01G398300.1 | Wheat | plastid | 76.24 | 54.71 |
| TraesCS3A01G367000.1 | Wheat | plastid | 76.24 | 54.71 |
| GSMUA_Achr1P17270_001 | Banana | plastid | 76.24 | 54.57 |
| KRH31096 | Soybean | plastid | 74.82 | 54.52 |
| HORVU3Hr1G085270.8 | Barley | plastid | 71.28 | 50.25 |
| KRH31099 | Soybean | peroxisome | 24.47 | 38.12 |
| CDY19443 | Canola | cytosol | 20.57 | 17.9 |
| CDY58803 | Canola | cytosol | 20.92 | 17.51 |
| CDY64046 | Canola | cytosol | 21.28 | 17.34 |
| CDY17136 | Canola | cytosol | 21.63 | 17.04 |
| CDY13182 | Canola | plastid | 24.11 | 16.55 |
| CDX76171 | Canola | plastid | 24.11 | 16.5 |
| CDY66557 | Canola | plastid | 24.11 | 16.31 |
| CDY60769 | Canola | plastid | 23.76 | 16.18 |
| CDY60767 | Canola | plastid | 23.76 | 16.11 |
| CDY07558 | Canola | mitochondrion, vacuole | 11.35 | 15.76 |
| CDY58267 | Canola | plastid | 22.34 | 15.52 |
| CDX84521 | Canola | cytosol | 21.99 | 14.32 |
| CDY67108 | Canola | cytosol | 18.79 | 6.02 |
Protein Annotations
| KEGG:00010+3.1.3.11 | KEGG:00030+3.1.3.11 | KEGG:00051+3.1.3.11 | KEGG:00680+3.1.3.11 | KEGG:00710+3.1.3.11 | Gene3D:3.30.540.10 |
| Gene3D:3.40.190.80 | MapMan:35.1 | GO:A0A078JC10 | UniProt:A0A078JC10 | EnsemblPlants:CDY63439 | ProteinID:CDY63439 |
| ProteinID:CDY63439.1 | InterPro:FBPase_N | InterPro:FBPase_class-1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 |
| EnsemblPlantsGene:GSBRNA2T00039293001 | PFAM:PF00316 | PIRSF:PIRSF000904 | PRINTS:PR01958 | PANTHER:PTHR11556 | PANTHER:PTHR11556:SF2 |
| MetaCyc:PWY-5484 | InterPro:SBPase | SUPFAM:SSF56655 | UniPathway:UPA00138 | UniParc:UPI0004EE3E8B | SEG:seg |
Description
BnaC06g42620DBnaC06g42620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JC10]
Coordinates
chrLK034300:-:1929..3534
Molecular Weight (calculated)
31109.6 Da
IEP (calculated)
5.208
GRAVY (calculated)
-0.003
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKCKIGQSL EEFLTQATPD KGLRTLLMCM GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEAALRLLCN TRMCVSTLAL KNIVDTNFTV
101: GTIFGVWPGD KLTGVTGVDQ VAAAMGIYGP RTTYVLAVKG FPGTHEFLLL DEGKWQHVKE TTEINEGKMF SPGNLRATFD NSEYSKLIDY YVKEKYTLDT
201: REEWFLTLTR LLLLFEVAPL GLLVENAGGF SSDGYKSVLD KTIVNLDDRT QVAYGSKNEI IRFEETLYGT SRLKNVPIGA TA
101: GTIFGVWPGD KLTGVTGVDQ VAAAMGIYGP RTTYVLAVKG FPGTHEFLLL DEGKWQHVKE TTEINEGKMF SPGNLRATFD NSEYSKLIDY YVKEKYTLDT
201: REEWFLTLTR LLLLFEVAPL GLLVENAGGF SSDGYKSVLD KTIVNLDDRT QVAYGSKNEI IRFEETLYGT SRLKNVPIGA TA
001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA
Arabidopsis Description
SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.