Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
extracellular: 22364583 plastid: 22908117 plastid: 25431925 extracellular: 26583031 plastid: 28183294 nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
26583031
doi
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
22364583
doi
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
msms PMID:
28183294
doi
Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.
msms PMID:
25431925
doi
Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. abinayamanivannan@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. brjeong@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. iuyiuy09@naver.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. prabhakaran.s.bioinfo@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. sobiyakhan126@gmail.com.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400069750 | Potato | cytosol, extracellular, plastid | 98.73 | 98.48 |
VIT_13s0019g03350.t01 | Wine grape | extracellular, plastid | 88.07 | 88.3 |
KRG97781 | Soybean | nucleus, plastid | 84.26 | 85.79 |
KRH31096 | Soybean | plastid | 84.01 | 85.53 |
CDX76072 | Canola | plastid | 81.98 | 81.98 |
CDX72200 | Canola | plastid | 81.73 | 81.73 |
CDY27264 | Canola | plastid | 81.47 | 81.68 |
Bra014720.1-P | Field mustard | plastid | 81.47 | 81.47 |
CDY02960 | Canola | plastid | 81.47 | 81.47 |
GSMUA_Achr1P17270_001 | Banana | plastid | 81.47 | 81.47 |
Bra007192.1-P | Field mustard | plastid | 81.22 | 81.42 |
AT3G55800.1 | Thale cress | plastid | 80.71 | 80.92 |
EES01767 | Sorghum | plastid | 77.92 | 80.16 |
CDX67626 | Canola | plastid | 79.7 | 79.7 |
Os04t0234600-01 | Rice | plastid | 78.93 | 79.34 |
TraesCS3B01G398300.1 | Wheat | plastid | 77.92 | 78.12 |
TraesCS3D01G359900.2 | Wheat | plastid, unclear | 77.67 | 77.86 |
TraesCS3A01G367000.1 | Wheat | plastid | 77.67 | 77.86 |
CDY63439 | Canola | cytosol | 55.58 | 77.66 |
Zm00001d042840_P001 | Maize | plastid | 74.62 | 77.57 |
Bra003221.1-P | Field mustard | plastid | 61.17 | 76.27 |
HORVU3Hr1G085270.8 | Barley | plastid | 74.62 | 73.5 |
KRH31099 | Soybean | peroxisome | 26.9 | 58.56 |
Solyc04g071340.2.1 | Tomato | cytosol, nucleus, plastid | 22.59 | 26.18 |
Solyc12g056530.1.1 | Tomato | plastid | 22.08 | 25.59 |
Solyc01g106010.2.1 | Tomato | plastid | 23.6 | 25.2 |
Solyc10g086720.1.1 | Tomato | cytosol | 19.04 | 24.75 |
Solyc09g011810.2.1 | Tomato | plastid | 23.6 | 23.08 |
Solyc10g086730.1.1 | Tomato | plastid | 22.34 | 21.52 |
Protein Annotations
KEGG:00010+3.1.3.11 | KEGG:00030+3.1.3.11 | KEGG:00051+3.1.3.11 | KEGG:00680+3.1.3.11 | KEGG:00710+3.1.3.11 | MapMan:1.2.8 |
Gene3D:3.30.540.10 | Gene3D:3.40.190.80 | UniProt:C5IU71 | InterPro:FBPase_N | InterPro:FBPase_class-1 | EMBL:FJ959073 |
InterPro:Fructose_bisphosphatase_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0005975 | GO:GO:0005986 | GO:GO:0006000 | GO:GO:0006002 | GO:GO:0006094 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 |
GO:GO:0016791 | GO:GO:0030388 | GO:GO:0042132 | GO:GO:0042578 | HAMAP:MF_01855 | PFAM:PF00316 |
PIRSF:PIRSF000904 | PRINTS:PR01958 | ScanProsite:PS00124 | PANTHER:PTHR11556 | PANTHER:PTHR11556:SF2 | InterPro:SBPase |
SUPFAM:SSF56655 | EnsemblPlantsGene:Solyc05g052600.2 | EnsemblPlants:Solyc05g052600.2.1 | UniParc:UPI0001A92639 | SEG:seg | : |
Description
Chloroplast sedoheptulose-1,7-bisphosphatase [Source:UniProtKB/TrEMBL;Acc:C5IU71]
Coordinates
chr5:+:62807839..62811226
Molecular Weight (calculated)
42590.0 Da
IEP (calculated)
6.308
GRAVY (calculated)
-0.087
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: METGVTCCAR VTSLLPNVSS QQYSTSIATS RSISPSFNSR SLKSSSLFGE SLRVAPKSSL KVSRTKNSSL VTKCEIGDSL EEFLSKSTSD KGLIRLMMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALTYSHFC KYACSEEVPE LQDMGGPAEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGRE QVAAAMGIFG PRTTYVLALK DVPGTHEFLL LDEGKWQHVK DTTEIGEGKM FSPGNLRATF DNPDYAKLIE YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGFLIEKAGG YSSDGKQSVL DKVIVNLDDR TQVAYGSKNE IIRFEETLYG SSRLKAGAPV GAAV
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALTYSHFC KYACSEEVPE LQDMGGPAEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGRE QVAAAMGIFG PRTTYVLALK DVPGTHEFLL LDEGKWQHVK DTTEIGEGKM FSPGNLRATF DNPDYAKLIE YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGFLIEKAGG YSSDGKQSVL DKVIVNLDDR TQVAYGSKNE IIRFEETLYG SSRLKAGAPV GAAV
001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA
Arabidopsis Description
SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.