Factsheet for Solyc09g011810.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052463	Potato	cytosol	98.01	96.81
Solyc10g086720.1.1	Tomato	cytosol	63.77	84.82
KRH49250	Soybean	nucleus, plastid	83.87	82.84
KRH00107	Soybean	nucleus, plastid	84.12	82.68
VIT_08s0007g01570.t01	Wine grape	plastid	84.37	82.52
Os03t0267300-01	Rice	plastid	76.92	76.35
Zm00001d028562_P001	Maize	plastid	75.93	74.09
KXG39716	Sorghum	plastid	75.19	74.08
TraesCS4D01G212000.1	Wheat	plastid	75.19	74.08
TraesCS4A01G093100.1	Wheat	plastid	75.19	74.08
HORVU4Hr1G060630.1	Barley	plastid	74.94	73.84
TraesCS4B01G211400.1	Wheat	plastid	74.94	73.84
CDY07558	Canola	mitochondrion, vacuole	33.25	66.01
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	79.9	64.79
Solyc10g086730.1.1	Tomato	plastid	63.77	62.84
Solyc12g056530.1.1	Tomato	plastid	44.17	52.35
Solyc04g071340.2.1	Tomato	cytosol, nucleus, plastid	43.92	52.06
Solyc01g106010.2.1	Tomato	plastid	35.98	39.3
Solyc05g052600.2.1	Tomato	plastid	23.08	23.6

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:1.2.6
Gene3D:3.30.540.10	Gene3D:3.40.190.80	InterPro:FBPase_N	InterPro:FBPase_class-1	InterPro:FBPtase	InterPro:Fructose_bisphosphatase_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0005986	GO:GO:0006000	GO:GO:0006002	GO:GO:0006094
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0016791	GO:GO:0030388	GO:GO:0042132	GO:GO:0042578	UniProt:K4CRK7	HAMAP:MF_01855
PFAM:PF00316	PIRSF:PIRSF000904	PIRSF:PIRSF500210	PRINTS:PR00115	ScanProsite:PS00124	PANTHER:PTHR11556
PANTHER:PTHR11556:SF28	SUPFAM:SSF56655	EnsemblPlantsGene:Solyc09g011810.2	EnsemblPlants:Solyc09g011810.2.1	UniParc:UPI00018C5895	SEG:seg

Description

Fructose-1,6-bisphosphatase, chloroplastic [Source:Projected from Arabidopsis thaliana (AT3G54050) UniProtKB/Swiss-Prot;Acc:P25851]

Coordinates

chr9:+:5090038..5092652

Molecular Weight (calculated)

44031.3 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.217

Length

403 amino acids

Sequence
(BLAST)

001: MAATATTSYL SALDKKTPFL FALDKKTPFL CPKNSTKRRS FNGGVKCMAI ETASGVTQTK KKSGYELQTL TSWLLRQEQA GVIDAELTIV ISSISMACKQ
101: IASLVQRAGI SNLTGVQGAV NIQGEDQKKL DVVSNEVFSN CLRSSGRTGI IASEEEDVPV AVEESYSGNY IVVFDPLDGS SNIDAAVSTG SIFGIYSPND
201: ECLADLGDDS TLDNIEQKCI VNVCQPGTNL LAAGYCMYSS SVIFVLTLGN GVFSFNLDPM YGEFVLTQEN VQIPKSGKIY SFNEGNYQLW DDKLKKYIDD
301: LKDPGPSGKP YSARYIGSLV GDFHRTLLYG GIYGYPRDRK SKNGKLRLLY ECAPMSFIVE QAGGKGSDGH QRVLDIQPTE IHQRVPLYIG STEEVEKLEK
401: YLS

Best Arabidopsis Sequence Match ( AT3G54050.1 )
(BLAST)

001: MAATAATTTS SHLLLSSSRH VASSSQPSIL SPRSLFSNNG KRAPTGVRNH QYASGVRCMA VAADAAETKT AARKKSGYEL QTLTGWLLRQ EMKGEIDAEL
101: TIVMSSISLA CKQIASLVQR AGISNLTGVQ GAVNIQGEDQ KKLDVISNEV FSNCLRSSGR TGIIASEEED VPVAVEESYS GNYVVVFDPL DGSSNIDAAV
201: STGSIFGIYS PNDECIVDDS DDISALGSEE QRCIVNVCQP GNNLLAAGYC MYSSSVIFVL TLGKGVFSFT LDPMYGEFVL TQENIEIPKA GRIYSFNEGN
301: YQMWDDKLKK YIDDLKDPGP TGKPYSARYI GSLVGDFHRT LLYGGIYGYP RDAKSKNGKL RLLYECAPMS FIVEQAGGKG SDGHSRVLDI QPTEIHQRVP
401: LYIGSTEEVE KLEKYLA

Arabidopsis Description

CFBP1Fructose-1,6-bisphosphatase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P25851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.