Factsheet for PGSC0003DMT400052463

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 9
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g011810.2.1	Tomato	plastid	96.81	98.01
KRH49250	Soybean	nucleus, plastid	83.33	83.33
KRH00107	Soybean	nucleus, plastid	83.33	82.93
VIT_08s0007g01570.t01	Wine grape	plastid	82.84	82.04
PGSC0003DMT400049395	Potato	plastid	80.39	80.39
Os03t0267300-01	Rice	plastid	76.47	76.85
TraesCS4A01G093100.1	Wheat	plastid	75.98	75.79
HORVU4Hr1G060630.1	Barley	plastid	75.74	75.55
TraesCS4D01G212000.1	Wheat	plastid	75.74	75.55
TraesCS4B01G211400.1	Wheat	plastid	75.74	75.55
KXG39716	Sorghum	plastid	75.25	75.06
Zm00001d028562_P001	Maize	plastid	75.49	74.58
CDY07558	Canola	mitochondrion, vacuole	32.6	65.52
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	77.94	63.98
PGSC0003DMT400049394	Potato	mitochondrion, plastid	62.75	62.59
PGSC0003DMT400061951	Potato	cytosol	43.38	52.06
PGSC0003DMT400027988	Potato	cytosol	43.38	52.06
PGSC0003DMT400083786	Potato	plastid	35.54	39.3
PGSC0003DMT400069750	Potato	cytosol, extracellular, plastid	23.04	23.8

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:1.2.6
Gene3D:3.30.540.10	Gene3D:3.40.190.80	ProteinID:AAD25541	ProteinID:AAD25541.1	EMBL:AF134051	InterPro:FBPase_N
InterPro:FBPase_class-1	InterPro:FBPtase	InterPro:Fructose_bisphosphatase_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791
GO:GO:0042132	GO:GO:0042578	UniProt:M1BTG2	HAMAP:MF_01855	PFAM:PF00316	EnsemblPlantsGene:PGSC0003DMG400020363
PGSC:PGSC0003DMG400020363	EnsemblPlants:PGSC0003DMT400052463	PIRSF:PIRSF000904	PIRSF:PIRSF500210	PRINTS:PR00115	ScanProsite:PS00124
PANTHER:PTHR11556	PANTHER:PTHR11556:SF28	SUPFAM:SSF56655	UniParc:UPI0002959585	SEG:seg	:

Description

Fructose-1,6-bisphosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400020363]

Coordinates

chr9:-:739210..741850

Molecular Weight (calculated)

44495.7 Da

IEP (calculated)

5.027

GRAVY (calculated)

-0.220

Length

408 amino acids

Sequence
(BLAST)

001: MAASAATATA TTSYLCALDK KTPFLFALDK KTPFLCPKNS TKRRSFNGGV KCMAIETTSG YTATKKRSGY ELQTLTSWLL RQEQAGVIDA ELTIVISSIS
101: MACKQIASLV QRAGISNLTG VQGAVNIQGE DQKKLDVVSN EVFSNCLRSS GRTGIIASEE EDVPVAVEES YSGNYIVVFD PLDGSSNIDA AVSTGSIFGI
201: YSPNDECLAD HGDDSTLDNI EQKCIVNVCQ PGTNLLAAGY CMYSSSVIFV LTLGNGVFSF NLDPMYGEFV LTQENVQIPK SGKIYSFNEG NYQLWDDKLK
301: KYIDDLKDPG PSGKPYSARY IGSLVGDFHR TLLYGGIYGY PRDQKSKNGK LRLLYECAPM SFIVEQAGGK GSDGHQRVLD IQPTEVHQRV PLYIGSTEEV
401: EKLEKYLS

Best Arabidopsis Sequence Match ( AT3G54050.1 )
(BLAST)

001: MAATAATTTS SHLLLSSSRH VASSSQPSIL SPRSLFSNNG KRAPTGVRNH QYASGVRCMA VAADAAETKT AARKKSGYEL QTLTGWLLRQ EMKGEIDAEL
101: TIVMSSISLA CKQIASLVQR AGISNLTGVQ GAVNIQGEDQ KKLDVISNEV FSNCLRSSGR TGIIASEEED VPVAVEESYS GNYVVVFDPL DGSSNIDAAV
201: STGSIFGIYS PNDECIVDDS DDISALGSEE QRCIVNVCQP GNNLLAAGYC MYSSSVIFVL TLGKGVFSFT LDPMYGEFVL TQENIEIPKA GRIYSFNEGN
301: YQMWDDKLKK YIDDLKDPGP TGKPYSARYI GSLVGDFHRT LLYGGIYGYP RDAKSKNGKL RLLYECAPMS FIVEQAGGKG SDGHSRVLDI QPTEIHQRVP
401: LYIGSTEEVE KLEKYLA

Arabidopsis Description

CFBP1Fructose-1,6-bisphosphatase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P25851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.