CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, vacuole
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13182	Canola	plastid	68.47	33.82
CDX76171	Canola	plastid	68.47	33.74
CDY66557	Canola	plastid	68.47	33.33
Solyc09g011810.2.1	Tomato	plastid	66.01	33.25
CDY60769	Canola	plastid	67.49	33.09
KRH49250	Soybean	nucleus, plastid	66.5	33.09
CDY60767	Canola	plastid	67.49	32.93
Os03t0267300-01	Rice	plastid	65.52	32.76
KRH00107	Soybean	nucleus, plastid	66.01	32.68
PGSC0003DMT400052463	Potato	cytosol	65.52	32.6
Zm00001d028562_P001	Maize	plastid	65.02	31.96
VIT_08s0007g01570.t01	Wine grape	plastid	64.53	31.8
KXG39716	Sorghum	plastid	64.04	31.78
TraesCS4A01G093100.1	Wheat	plastid	62.56	31.05
TraesCS4B01G211400.1	Wheat	plastid	62.56	31.05
TraesCS4D01G212000.1	Wheat	plastid	62.56	31.05
HORVU4Hr1G060630.1	Barley	plastid	62.07	30.81
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	64.04	26.16
CDY19443	Canola	cytosol	36.95	23.15
CDY58803	Canola	cytosol	37.93	22.85
CDY64046	Canola	cytosol	37.44	21.97
CDY17136	Canola	cytosol	36.95	20.95
CDY58267	Canola	plastid	35.96	17.98
CDX84521	Canola	cytosol	34.98	16.4
CDY27264	Canola	plastid	23.65	12.21
CDX67626	Canola	plastid	23.15	11.93
CDX72200	Canola	plastid	23.15	11.93
CDY02960	Canola	plastid	22.17	11.42
CDX76072	Canola	plastid	22.17	11.42
CDY63439	Canola	cytosol	15.76	11.35
CDY67108	Canola	cytosol	29.06	6.7

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	Gene3D:3.30.540.10
MapMan:50.3.1	GO:A0A078F7F9	UniProt:A0A078F7F9	EnsemblPlants:CDY07558	ProteinID:CDY07558	ProteinID:CDY07558.1
InterPro:FBPase_N	InterPro:FBPase_class-1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	EnsemblPlantsGene:GSBRNA2T00124623001
PFAM:PF00316	PANTHER:PTHR11556	PANTHER:PTHR11556:SF28	MetaCyc:PWY-5484	SUPFAM:SSF56655	SignalP:SignalP-noTM
UniPathway:UPA00138	UniParc:UPI0004EDE14C	:	:	:	:

Description

BnaC06g15060DBnaC06g15060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7F9]

Coordinates

chrLK031979:-:648972..650209

Molecular Weight (calculated)

22470.7 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.070

Length

203 amino acids

Sequence
(BLAST)

001: MFYWLFYSGL VFQTTSSLSN RIAVCGRTGI IASEEEDVPV AVEESYSGNY IVVFDPLDGS SNIDAAVSTG SIFGIYSPND ECLSRRNLRS WVRRSAEERC
101: IVNVCQPGNN LLVAGYWYPR DAKSKNGKLR LFYECAQMSF IVEQAGGKGS DGHLRVLDIQ PTKIHQRVPL YIGSKEEAGE VLGLSHVPNI SHLVSIVSHF
201: LTT

Best Arabidopsis Sequence Match ( AT3G54050.1 )
(BLAST)

001: MAATAATTTS SHLLLSSSRH VASSSQPSIL SPRSLFSNNG KRAPTGVRNH QYASGVRCMA VAADAAETKT AARKKSGYEL QTLTGWLLRQ EMKGEIDAEL
101: TIVMSSISLA CKQIASLVQR AGISNLTGVQ GAVNIQGEDQ KKLDVISNEV FSNCLRSSGR TGIIASEEED VPVAVEESYS GNYVVVFDPL DGSSNIDAAV
201: STGSIFGIYS PNDECIVDDS DDISALGSEE QRCIVNVCQP GNNLLAAGYC MYSSSVIFVL TLGKGVFSFT LDPMYGEFVL TQENIEIPKA GRIYSFNEGN
301: YQMWDDKLKK YIDDLKDPGP TGKPYSARYI GSLVGDFHRT LLYGGIYGYP RDAKSKNGKL RLLYECAPMS FIVEQAGGKG SDGHSRVLDI QPTEIHQRVP
401: LYIGSTEEVE KLEKYLA

Arabidopsis Description

CFBP1Fructose-1,6-bisphosphatase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P25851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.