CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55800.1	CDY32970	AT5G42980.1	15352244
AT3G55800.1	CDY43592	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007192.1-P	Field mustard	plastid	98.48	98.73
CDY27264	Canola	plastid	97.97	98.22
CDX76072	Canola	plastid	95.18	95.18
CDY02960	Canola	plastid	95.18	95.18
CDX67626	Canola	plastid	94.67	94.67
AT3G55800.1	Thale cress	plastid	94.42	94.66
CDY63439	Canola	cytosol	63.45	88.65
PGSC0003DMT400069750	Potato	cytosol, extracellular, plastid	82.23	82.03
VIT_13s0019g03350.t01	Wine grape	extracellular, plastid	81.73	81.93
Solyc05g052600.2.1	Tomato	plastid	81.73	81.73
KRG97781	Soybean	nucleus, plastid	78.93	80.36
KRH31096	Soybean	plastid	78.68	80.1
GSMUA_Achr1P17270_001	Banana	plastid	77.67	77.67
EES01767	Sorghum	plastid	74.62	76.76
Os04t0234600-01	Rice	plastid	75.63	76.02
TraesCS3B01G398300.1	Wheat	plastid	75.13	75.32
TraesCS3A01G367000.1	Wheat	plastid	74.87	75.06
TraesCS3D01G359900.2	Wheat	plastid, unclear	74.87	75.06
Zm00001d042840_P001	Maize	plastid	72.08	74.93
HORVU3Hr1G085270.8	Barley	plastid	71.57	70.5
KRH31099	Soybean	peroxisome	25.38	55.25
CDY19443	Canola	cytosol	21.07	25.62
CDY58803	Canola	cytosol	21.32	24.93
CDY64046	Canola	cytosol	21.57	24.57
CDY17136	Canola	cytosol	21.83	24.02
CDY07558	Canola	mitochondrion, vacuole	11.93	23.15
CDX76171	Canola	plastid	24.11	23.06
CDY66557	Canola	plastid	24.37	23.02
CDY60769	Canola	plastid	24.11	22.95
CDY13182	Canola	plastid	23.86	22.87
CDY60767	Canola	plastid	24.11	22.84
CDY58267	Canola	plastid	22.08	21.43
CDX84521	Canola	cytosol	22.34	20.32
CDY67108	Canola	cytosol	19.8	8.86

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:1.2.8
Gene3D:3.30.540.10	Gene3D:3.40.190.80	GO:A0A078C5U2	EnsemblPlants:CDX72200	ProteinID:CDX72200	ProteinID:CDX72200.1
InterPro:FBPase_N	InterPro:FBPase_class-1	InterPro:Fructose_bisphosphatase_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0016791	GO:GO:0042578
EnsemblPlantsGene:GSBRNA2T00156033001	HAMAP:MF_01855	PFAM:PF00316	PIRSF:PIRSF000904	PRINTS:PR01958	ScanProsite:PS00124
PANTHER:PTHR11556	PANTHER:PTHR11556:SF2	MetaCyc:PWY-5484	InterPro:SBPase	SUPFAM:SSF56655	UniPathway:UPA00138
UniParc:UPI0004EC142E	SEG:seg	:	:	:	:

Description

BnaC08g26740D

Coordinates

chrLK031795:-:2970220..2972444

Molecular Weight (calculated)

42554.8 Da

IEP (calculated)

5.877

GRAVY (calculated)

-0.124

Length

394 amino acids

Sequence
(BLAST)

001: METSVTCYSR GVLLPRVSSQ RSPSLVTPPS SFSTSSSFKG LKSSSIFGDS LRVAPRSQLK ATKPKSNGAS SVTKCEIGQS LEEFLTQATP DKGLRTLLMC
101: MGEALRTIAF KVRTASCGGT ACVNSFGDEQ LAVDMLADKL LFEALQYSHV CKYACSEEVP ELQDMGGPVE GGFSVAFDPL DGSSIVDTNF TVGTIFGVWP
201: GDKLTGVTGG DQVAAAMGIY GPRTTYVLAV KGFPGTHEFL LLDEGKWQHV KETTEINEGK MFSPGNLRAT FDNSEYSKLI DYYVKEKYTL RYTGGMVPDV
301: NQIIVKEKGI FTNVTSPTAK AKLRLLFEVA PLGLLVENAG GFSSDGYNSV LDKTIVNLDD RTQVAYGSKN EIIRFEETLY GTSRLKNVPI GVTA

Best Arabidopsis Sequence Match ( AT3G55800.1 )
(BLAST)

001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA

Arabidopsis Description

SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.