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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 11
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU78269

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G55800.1 OQU78269 AT5G42980.1 15352244
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042840_P001 Maize plastid 93.99 94.99
Os04t0234600-01 Rice plastid 94.52 92.35
TraesCS3D01G359900.2 Wheat plastid, unclear 93.99 91.6
TraesCS3B01G398300.1 Wheat plastid 93.73 91.35
TraesCS3A01G367000.1 Wheat plastid 93.47 91.09
HORVU3Hr1G085270.8 Barley plastid 88.51 84.75
VIT_13s0019g03350.t01 Wine grape extracellular, plastid 81.2 79.13
GSMUA_Achr1P17270_001 Banana plastid 80.94 78.68
Solyc05g052600.2.1 Tomato plastid 80.16 77.92
PGSC0003DMT400069750 Potato cytosol, extracellular, plastid 79.9 77.47
CDY63439 Canola cytosol 56.14 76.24
KRH31096 Soybean plastid 77.02 76.23
KRG97781 Soybean nucleus, plastid 76.5 75.71
CDX76072 Canola plastid 77.55 75.38
Bra007192.1-P Field mustard plastid 77.28 75.32
Bra014720.1-P Field mustard plastid 77.28 75.13
AT3G55800.1 Thale cress plastid 77.02 75.06
CDY27264 Canola plastid 77.02 75.06
CDY02960 Canola plastid 77.02 74.87
CDX72200 Canola plastid 76.76 74.62
CDX67626 Canola plastid 76.76 74.62
Bra003221.1-P Field mustard plastid 58.49 70.89
KRH31099 Soybean peroxisome 27.94 59.12
KXG22100 Sorghum cytosol 23.5 26.39
KXG33753 Sorghum cytosol 23.24 25.95
KXG39716 Sorghum plastid 23.76 22.25
EER90172 Sorghum plastid 22.72 21.97
Protein Annotations
KEGG:00010+3.1.3.11KEGG:00030+3.1.3.11KEGG:00051+3.1.3.11KEGG:00680+3.1.3.11KEGG:00710+3.1.3.11MapMan:1.2.8
Gene3D:3.30.540.10Gene3D:3.40.190.80EntrezGene:8060106UniProt:C5XPV6EnsemblPlants:EES01767ProteinID:EES01767
ProteinID:EES01767.1InterPro:FBPase_NInterPro:FBPase_class-1InterPro:Fructose_bisphosphatase_ASGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005975
GO:GO:0005986GO:GO:0006000GO:GO:0006002GO:GO:0006094GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009536GO:GO:0009570GO:GO:0009579GO:GO:0009605
GO:GO:0009607GO:GO:0009941GO:GO:0009987GO:GO:0016311GO:GO:0016787GO:GO:0016791
GO:GO:0019252GO:GO:0030388GO:GO:0042132GO:GO:0042578GO:GO:0042742GO:GO:0048046
GO:GO:0050278HAMAP:MF_01855PFAM:PF00316PIRSF:PIRSF000904PRINTS:PR01958ScanProsite:PS00124
PANTHER:PTHR11556PANTHER:PTHR11556:SF2MetaCyc:PWY-5484InterPro:SBPaseEnsemblPlantsGene:SORBI_3003G359100SUPFAM:SSF56655
unigene:Sbi.3281UniParc:UPI0001A8467CRefSeq:XP_002456647.1:::
Description
hypothetical protein
Coordinates
chr3:+:67646026..67649161
Molecular Weight (calculated)
41360.4 Da
IEP (calculated)
5.822
GRAVY (calculated)
-0.103
Length
383 amino acids
Sequence
(BLAST)
001: MEIVATRSPA CCAAVSFSQS YSRPKASRPA TTFYGESVRV NTARPLSARQ SKAVSRAALT TRCEIGDSLE EFLTKATPDK NLIRLLICMG EAMRTIAFKV
101: RTASCGGTAC VNSFGDEQLA VDMLANKLLF EALEYSHVCK YACSEEVPEL QDMGGPVEGG FSVAFDPLDG SSIVDTNFTV GTIFGVWPGD KLTGVTGGDQ
201: VAAAMGIYGP RTTYIVALKD CPGTHEFLLL DEGKWQHVKD TTTIGEGKMF SPGNLRATFD NPEYDKLINY YVKEKYTLRY TGGMVPDVNQ IIVKEKGIFT
301: NVTSPTAKAK LRLLFEVAPL GLLIEKAGGH SSDGKQSVLD KVINELDERT QVAYGSKNEI IRFEETLYGS SRLAAGATVG AAV
Best Arabidopsis Sequence Match ( AT3G55800.1 )
(BLAST)
001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA
Arabidopsis Description
SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.