CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046942_P001	Maize	plastid	93.43	92.96
Os06t0664200-01	Rice	plastid	85.61	84.54
TraesCS7A01G484200.1	Wheat	plastid	80.56	81.59
TraesCS7B01G387900.1	Wheat	plastid	81.57	81.16
TraesCS7D01G471600.1	Wheat	plastid	80.81	80.6
HORVU7Hr1G109280.3	Barley	cytosol	67.68	73.63
VIT_03s0038g00370.t01	Wine grape	cytosol	66.16	72.38
Solyc01g106010.2.1	Tomato	plastid	65.66	70.46
PGSC0003DMT400083786	Potato	plastid	64.65	69.38
KRH42081	Soybean	plastid	67.42	66.75
KRH49837	Soybean	plastid	66.92	66.25
AT5G64380.1	Thale cress	plastid	66.41	65.1
Bra024291.1-P	Field mustard	plastid	65.91	64.29
CDY58267	Canola	plastid	65.91	64.29
CDX84521	Canola	cytosol	65.91	60.28
GSMUA_Achr11P...	Banana	plastid	67.93	45.36
KXG22100	Sorghum	cytosol	33.84	39.3
KXG33753	Sorghum	cytosol	33.08	38.19
KXG39716	Sorghum	plastid	37.37	36.19
EES01767	Sorghum	plastid	21.97	22.72

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	Gene3D:3.30.540.10
Gene3D:3.40.190.80	MapMan:50.3.1	EntrezGene:8069388	UniProt:C5Z7C5	EnsemblPlants:EER90172	ProteinID:EER90172
ProteinID:EER90172.1	InterPro:FBPase_N	InterPro:FBPase_class-1	InterPro:FBPtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975
GO:GO:0005986	GO:GO:0006000	GO:GO:0006002	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0030388	GO:GO:0042132	HAMAP:MF_01855	ProteinID:OQU76835.1
PFAM:PF00316	PIRSF:PIRSF000904	PIRSF:PIRSF500210	PRINTS:PR00115	PANTHER:PTHR11556	PANTHER:PTHR11556:SF12
MetaCyc:PWY-5484	EnsemblPlantsGene:SORBI_3010G219700	SUPFAM:SSF56655	unigene:Sbi.2387	UniParc:UPI0001A89B4E	RefSeq:XP_002438805.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:56187502..56190622

Molecular Weight (calculated)

42916.4 Da

IEP (calculated)

7.359

GRAVY (calculated)

-0.163

Length

396 amino acids

Sequence
(BLAST)

001: MPLSSLSLLR HHPPRPLPPT SNRQPPPPQP RLLLPPFTGR RAFVCQPLAA ATDDMAAAAA AASPPTLLEH MGQAGTAADL TVLVAHIQSA CKRIAALVAS
101: PGNAELSRSN KAGRGTVAAG RDAPKPLDEL SNDIILSSLQ SSGKVAVLAS EENDLPIWIS NDGPYVVVTD PLDGSRNIEV SIPTGTIFGI YNRLVELDHL
201: PLEERAQLNS LQSGTRLVAA GYVLYSSATI LCISFGAGTH AFTLDWSTGE FILTHPSIQI PPRGQIYSVN DARYFDWPEG LRKYIDTIRQ GKGQHPKKYS
301: ARYVCSLVAD FHRTLIYGGV AMNPRDHLRL VYEANPLSFL AEQAGGRGSD GKNRILNIQP VKLHQRLPLF LGSIDDMLEL ESYGDVQQKV NPGYEV

Best Arabidopsis Sequence Match ( AT5G64380.1 )
(BLAST)

001: MQSLTLTRYP TPISPPRLNL YPLRQIAASV LSAPTAGINR RDMASRHQST SFKPLAVGRN LTGDDDDGYC TLIDFAGSGG GEGKNVGEDL VVLLYHLQHA
101: CKRIASLVAS PFNSSLGKLS VNSSSGSDRD APKPLDIVSN DIVLSSLRNS GKVAVMASEE NDSPTWIKDD GPYVVVVDPL DGSRNIDASI PTGTIFGIYN
201: RLVELDHLPV EEKAELNSLQ RGSRLVASGY VLYSSATIFC VTLGSGTHAF TLDHSTGEFV LTHQNIKIPT RGQIYSVNDA RYFDWPEGLR KYIDTVRQGK
301: GQNPKKYSAR YICSLVADLH RTLLYGGVAM NPRDHLRLVY EGNPLAFLVE QAGGKSSDGK RGILSIQPVK LHQRLPLFLG SLEDVAELES YGDVQQTVNP
401: GYEV

Arabidopsis Description

AT5g64380/MSJ1_22 [Source:UniProtKB/TrEMBL;Acc:Q9FMF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.