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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58267 Canola plastid 90.35 89.9
Bra024291.1-P Field mustard plastid 89.6 89.16
CDX84521 Canola cytosol 89.11 83.14
VIT_03s0038g00370.t01 Wine grape cytosol 68.07 75.97
Solyc01g106010.2.1 Tomato plastid 65.59 71.82
PGSC0003DMT400083786 Potato plastid 65.1 71.27
KRH42081 Soybean plastid 70.05 70.75
KRH49837 Soybean plastid 69.8 70.5
EER90172 Sorghum plastid 65.1 66.41
Os06t0664200-01 Rice plastid 65.35 65.84
TraesCS7A01G484200.1 Wheat plastid 63.61 65.73
TraesCS7D01G471600.1 Wheat plastid 64.11 65.24
Zm00001d046942_P001 Maize plastid 64.11 65.08
TraesCS7B01G387900.1 Wheat plastid 64.11 65.08
HORVU7Hr1G109280.3 Barley cytosol 58.42 64.84
GSMUA_Achr11P... Banana plastid 65.84 44.86
AT1G43670.1 Thale cress cytosol 32.92 39.0
AT3G54050.1 Thale cress plastid 37.38 36.21
AT3G55800.1 Thale cress plastid 21.04 21.63
Protein Annotations
KEGG:00010+3.1.3.11KEGG:00030+3.1.3.11KEGG:00051+3.1.3.11KEGG:00680+3.1.3.11KEGG:00710+3.1.3.11Gene3D:3.30.540.10
Gene3D:3.40.190.80MapMan:50.3.1EntrezGene:836559UniProt:A0A1S5M0M6ProteinID:AED97882.1ArrayExpress:AT5G64380
EnsemblPlantsGene:AT5G64380RefSeq:AT5G64380TAIR:AT5G64380RefSeq:AT5G64380-TAIR-GEnsemblPlants:AT5G64380.1TAIR:AT5G64380.1
EMBL:AY062116EMBL:AY085836EMBL:AY124877Unigene:At.27350ProteinID:BAB09869.1InterPro:FBPase_N
InterPro:FBPase_class-1InterPro:FBPtaseGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0005986GO:GO:0006000
GO:GO:0006002GO:GO:0006094GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0016311GO:GO:0016787GO:GO:0016791
GO:GO:0030388GO:GO:0042132HAMAP:MF_01855RefSeq:NP_201243.1ProteinID:OAO91430.1PFAM:PF00316
PIRSF:PIRSF000904PIRSF:PIRSF500210PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PRINTS:PR00115PANTHER:PTHR11556PANTHER:PTHR11556:SF12UniProt:Q9FMF1SUPFAM:SSF56655
UniParc:UPI00000A9579SEG:seg::::
Description
AT5g64380/MSJ1_22 [Source:UniProtKB/TrEMBL;Acc:Q9FMF1]
Coordinates
chr5:+:25741238..25743198
Molecular Weight (calculated)
43978.2 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.238
Length
404 amino acids
Sequence
(BLAST)
001: MQSLTLTRYP TPISPPRLNL YPLRQIAASV LSAPTAGINR RDMASRHQST SFKPLAVGRN LTGDDDDGYC TLIDFAGSGG GEGKNVGEDL VVLLYHLQHA
101: CKRIASLVAS PFNSSLGKLS VNSSSGSDRD APKPLDIVSN DIVLSSLRNS GKVAVMASEE NDSPTWIKDD GPYVVVVDPL DGSRNIDASI PTGTIFGIYN
201: RLVELDHLPV EEKAELNSLQ RGSRLVASGY VLYSSATIFC VTLGSGTHAF TLDHSTGEFV LTHQNIKIPT RGQIYSVNDA RYFDWPEGLR KYIDTVRQGK
301: GQNPKKYSAR YICSLVADLH RTLLYGGVAM NPRDHLRLVY EGNPLAFLVE QAGGKSSDGK RGILSIQPVK LHQRLPLFLG SLEDVAELES YGDVQQTVNP
401: GYEV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.