Factsheet for VIT_03s0038g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g106010.2.1	Tomato	plastid	79.01	77.51
PGSC0003DMT400083786	Potato	plastid	78.45	76.96
KRH49837	Soybean	plastid	80.94	73.25
KRH42081	Soybean	plastid	80.11	72.5
AT5G64380.1	Thale cress	plastid	75.97	68.07
Bra024291.1-P	Field mustard	plastid	75.97	67.73
CDY58267	Canola	plastid	75.97	67.73
TraesCS7A01G484200.1	Wheat	plastid	71.55	66.24
HORVU7Hr1G109280.3	Barley	cytosol	66.57	66.21
EER90172	Sorghum	plastid	72.38	66.16
Os06t0664200-01	Rice	plastid	72.65	65.59
TraesCS7B01G387900.1	Wheat	plastid	72.1	65.58
TraesCS7D01G471600.1	Wheat	plastid	71.82	65.49
Zm00001d046942_P001	Maize	plastid	71.82	65.33
CDX84521	Canola	cytosol	76.8	64.2
GSMUA_Achr11P...	Banana	plastid	75.41	46.04
VIT_18s0072g00770.t01	Wine grape	cytosol	36.19	38.64
VIT_08s0007g01570.t01	Wine grape	plastid	43.09	37.86
VIT_08s0007g01590.t01	Wine grape	cytosol	38.67	37.43
VIT_13s0019g03350.t01	Wine grape	extracellular, plastid	25.41	23.41

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	EntrezGene:100247107
wikigene:100247107	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:50.3.1	ProteinID:CBI38227	ProteinID:CBI38227.3
UniProt:D7U658	InterPro:FBPase_N	InterPro:FBPase_class-1	InterPro:FBPtase	EMBL:FN596515	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0005986	GO:GO:0006000	GO:GO:0006002	GO:GO:0006094	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791
GO:GO:0030388	GO:GO:0042132	EntrezGene:LOC100247107	wikigene:LOC100247107	HAMAP:MF_01855	PFAM:PF00316
PIRSF:PIRSF000904	PIRSF:PIRSF500210	PRINTS:PR00115	PANTHER:PTHR11556	PANTHER:PTHR11556:SF12	SUPFAM:SSF56655
TIGR:TC58063	UniParc:UPI0001985ABB	ArrayExpress:VIT_03s0038g00370	EnsemblPlantsGene:VIT_03s0038g00370	EnsemblPlants:VIT_03s0038g00370.t01	unigene:Vvi.1492
RefSeq:XP_002270826	RefSeq:XP_002270826.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3_random:-:357420..361583

Molecular Weight (calculated)

39194.7 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.135

Length

362 amino acids

Sequence
(BLAST)

001: MASFSRIGVS SEVGGVRSSS GGDDGVGTLM EFVGKRGVDV GDELVVLFHH IQYACKRIAA LVASPFNSTL GKHSGLGGGG GAGGSDRDAP KPLDIVSNEI
101: ILSSLRNSGK VAVMASEEDD FPVWISDDGP FVVVTDPLDG SRNIDASIPT GTIFGIYNRL VELDHLPKEE KTMLNSLQSG LKLVAAVYVL YSSATILCTS
201: FGSGTHAFTL DHSTGDFILT HPNIKIPPRG QIYSVNDARY FDWPQGLRQY IDTVRQGKGK YPKKYSARYI CSLVADFHRT LMYGGVAMNP RSHLRLVYEA
301: NPLSFLVEQA GGRGSDGKIR ILSIQPVKLH QRLPLFLGSP EDIEELESYG NVQQKVNPGY EV

Best Arabidopsis Sequence Match ( AT5G64380.1 )
(BLAST)

001: MQSLTLTRYP TPISPPRLNL YPLRQIAASV LSAPTAGINR RDMASRHQST SFKPLAVGRN LTGDDDDGYC TLIDFAGSGG GEGKNVGEDL VVLLYHLQHA
101: CKRIASLVAS PFNSSLGKLS VNSSSGSDRD APKPLDIVSN DIVLSSLRNS GKVAVMASEE NDSPTWIKDD GPYVVVVDPL DGSRNIDASI PTGTIFGIYN
201: RLVELDHLPV EEKAELNSLQ RGSRLVASGY VLYSSATIFC VTLGSGTHAF TLDHSTGEFV LTHQNIKIPT RGQIYSVNDA RYFDWPEGLR KYIDTVRQGK
301: GQNPKKYSAR YICSLVADLH RTLLYGGVAM NPRDHLRLVY EGNPLAFLVE QAGGKSSDGK RGILSIQPVK LHQRLPLFLG SLEDVAELES YGDVQQTVNP
401: GYEV

Arabidopsis Description

AT5g64380/MSJ1_22 [Source:UniProtKB/TrEMBL;Acc:Q9FMF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.