Factsheet for VIT_13s0019g03350.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 23391302

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g052600.2.1	Tomato	plastid	88.3	88.07
PGSC0003DMT400069750	Potato	cytosol, extracellular, plastid	88.04	87.59
KRH31096	Soybean	plastid	86.01	87.34
KRG97781	Soybean	nucleus, plastid	85.75	87.08
GSMUA_Achr1P17270_001	Banana	plastid	83.21	82.99
CDX76072	Canola	plastid	82.95	82.74
Bra014720.1-P	Field mustard	plastid	82.7	82.49
CDY02960	Canola	plastid	82.44	82.23
Bra007192.1-P	Field mustard	plastid	81.93	81.93
CDX72200	Canola	plastid	81.93	81.73
CDY27264	Canola	plastid	81.68	81.68
CDX67626	Canola	plastid	81.42	81.22
EES01767	Sorghum	plastid	79.13	81.2
AT3G55800.1	Thale cress	plastid	80.92	80.92
Os04t0234600-01	Rice	plastid	79.9	80.1
TraesCS3B01G398300.1	Wheat	plastid	78.88	78.88
TraesCS3A01G367000.1	Wheat	plastid	78.63	78.63
TraesCS3D01G359900.2	Wheat	plastid, unclear	78.63	78.63
Zm00001d042840_P001	Maize	plastid	75.57	78.36
Bra003221.1-P	Field mustard	plastid	62.85	78.16
CDY63439	Canola	cytosol	55.47	77.31
HORVU3Hr1G085270.8	Barley	plastid	75.06	73.75
KRH31099	Soybean	peroxisome	27.23	59.12
VIT_18s0072g00770.t01	Wine grape	cytosol	22.9	26.55
VIT_03s0038g00370.t01	Wine grape	cytosol	23.41	25.41
VIT_08s0007g01570.t01	Wine grape	plastid	25.7	24.51
VIT_08s0007g01590.t01	Wine grape	cytosol	23.16	24.33

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:1.2.8
EntrezGene:100260169	wikigene:100260169	Gene3D:3.30.540.10	Gene3D:3.40.190.80	ProteinID:CBI31540	ProteinID:CBI31540.3
UniProt:D7TMH3	InterPro:FBPase_N	InterPro:FBPase_class-1	EMBL:FN595998	InterPro:Fructose_bisphosphatase_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0005986	GO:GO:0006000	GO:GO:0006002	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0030388
GO:GO:0042132	GO:GO:0042578	EntrezGene:LOC100260169	wikigene:LOC100260169	HAMAP:MF_01855	PFAM:PF00316
PIRSF:PIRSF000904	PRINTS:PR01958	ScanProsite:PS00124	PANTHER:PTHR11556	PANTHER:PTHR11556:SF2	InterPro:SBPase
SUPFAM:SSF56655	TIGR:TC54570	UniParc:UPI00015CDA4C	ArrayExpress:VIT_13s0019g03350	EnsemblPlantsGene:VIT_13s0019g03350	EnsemblPlants:VIT_13s0019g03350.t01
unigene:Vvi.7930	RefSeq:XP_002263049	RefSeq:XP_002263049.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr13:+:4389058..4391999

Molecular Weight (calculated)

42527.7 Da

IEP (calculated)

6.263

GRAVY (calculated)

-0.093

Length

393 amino acids

Sequence
(BLAST)

001: METGVTCYAR GAFLHTSVSS QHSTALVSPP SISPSFSSKS LRSSSLFGES LRVVPRSSLK VSRTKNSSLV TRCEVGDSLE EFLTKATPDK GLIRLMMCMG
101: EALRTIAFKV RTASCGGTAC VNSFGDEQLA VDMVANQLLF EALNYSHFCK HACSEEVPDL QDMGGPVEGG FSVAFDPLDG SSIVDTNFTV GTIFGVWPGD
201: KLTGVTGRDQ VAAAMGIYGP RTTYVLALKD IPGTHEFLLL DEGKWQHVKD TTEIGEGKLF SPGNLRATFD NPDYDKLINY YVREKYTLRY TGGMVPDVNQ
301: IIVKEKGIFT NVTSPSSKAK LRLLFEVAPL GFLIEKAGGF SSDGTQSVLD KVINNLDERT QVAYGSKNEI IRFEETLYGS SRLKAGVPVG AAV

Best Arabidopsis Sequence Match ( AT3G55800.1 )
(BLAST)

001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA

Arabidopsis Description

SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.