Factsheet for Bra014720.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55800.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76072	Canola	plastid	99.49	99.49
CDY02960	Canola	plastid	98.48	98.48
Bra007192.1-P	Field mustard	plastid	94.67	94.91
AT3G55800.1	Thale cress	plastid	94.42	94.66
Bra003221.1-P	Field mustard	plastid	74.62	93.04
VIT_13s0019g03350.t01	Wine grape	extracellular, plastid	82.49	82.7
PGSC0003DMT400069750	Potato	cytosol, extracellular, plastid	81.98	81.77
Solyc05g052600.2.1	Tomato	plastid	81.47	81.47
KRG97781	Soybean	nucleus, plastid	79.19	80.62
KRH31096	Soybean	plastid	78.93	80.36
GSMUA_Achr1P17270_001	Banana	plastid	77.67	77.67
EES01767	Sorghum	plastid	75.13	77.28
Os04t0234600-01	Rice	plastid	76.14	76.53
TraesCS3B01G398300.1	Wheat	plastid	75.38	75.57
TraesCS3D01G359900.2	Wheat	plastid, unclear	75.13	75.32
TraesCS3A01G367000.1	Wheat	plastid	75.13	75.32
Zm00001d042840_P001	Maize	plastid	72.33	75.2
HORVU3Hr1G085270.8	Barley	plastid	71.83	70.75
KRH31099	Soybean	peroxisome	25.63	55.8
Bra005526.1-P	Field mustard	cytosol	19.04	26.22
Bra014005.1-P	Field mustard	cytosol	21.83	25.52
Bra014841.1-P	Field mustard	plastid	24.87	23.79
Bra007041.1-P	Field mustard	plastid	24.62	23.43
Bra024291.1-P	Field mustard	plastid	21.32	20.69

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:1.2.8
Gene3D:3.30.540.10	Gene3D:3.40.190.80	EnsemblPlantsGene:Bra014720	EnsemblPlants:Bra014720.1	EnsemblPlants:Bra014720.1-P	InterPro:FBPase_N
InterPro:FBPase_class-1	InterPro:Fructose_bisphosphatase_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0042578
UniProt:M4DE01	HAMAP:MF_01855	PFAM:PF00316	PIRSF:PIRSF000904	PRINTS:PR01958	ScanProsite:PS00124
PANTHER:PTHR11556	PANTHER:PTHR11556:SF2	InterPro:SBPase	SUPFAM:SSF56655	UniParc:UPI000254494E	SEG:seg

Description

AT3G55800 (E=1e-198) SBPASE | SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase

Coordinates

chrA04:-:2499868..2501768

Molecular Weight (calculated)

42734.9 Da

IEP (calculated)

5.893

GRAVY (calculated)

-0.156

Length

394 amino acids

Sequence
(BLAST)

001: METSVTCYSR GIILPSVSSQ RSSTLVSPPS SFSASSSFKR LKSSSIFGES LRVEPRSQLK ATKAKNNGGS TVTKCEIGQS LEEFLREATP DKGLRTLLMC
101: MGEALRTIAF KVRTASCGGT ACVNSFGDEQ LAVDMLADKL LFEALQYSHV CKYACSEEVP ELQDMGGPVE GGFSVAFDPL DGSSIVDTNF TVGTIFGVWP
201: GDKLTGVTGG DQVAAAMGIY GPRTTYVLAV KGFPGTHEFL LLDEGKWQHV KETTEINEGK MFSPGNLRAT FDNSEYSKLI DYYVKEKYTL RYTGGMVPDV
301: NQIIVKEKGI FTNVTSPTAK AKLRLLFEVA PLGLLIENAG GFSSDGYKSV LDKTIVNLDD RTQVAYGSKN EIIRFEETLY GTSRFKNVPI GANA

Best Arabidopsis Sequence Match ( AT3G55800.1 )
(BLAST)

001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA

Arabidopsis Description

SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.