Factsheet for Bra003221.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55800.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67626	Canola	plastid	95.57	76.65
Bra014720.1-P	Field mustard	plastid	93.04	74.62
AT3G55800.1	Thale cress	plastid	91.77	73.79
Bra007192.1-P	Field mustard	plastid	91.77	73.79
CDY63439	Canola	cytosol	58.23	65.25
VIT_13s0019g03350.t01	Wine grape	extracellular, plastid	78.16	62.85
PGSC0003DMT400069750	Potato	cytosol, extracellular, plastid	77.22	61.77
Solyc05g052600.2.1	Tomato	plastid	76.27	61.17
KRG97781	Soybean	nucleus, plastid	74.68	60.98
KRH31096	Soybean	plastid	74.05	60.47
GSMUA_Achr1P17270_001	Banana	plastid	74.68	59.9
EES01767	Sorghum	plastid	70.89	58.49
Os04t0234600-01	Rice	plastid	72.15	58.16
TraesCS3B01G398300.1	Wheat	plastid	71.52	57.51
TraesCS3A01G367000.1	Wheat	plastid	71.2	57.25
TraesCS3D01G359900.2	Wheat	plastid, unclear	71.2	57.25
Zm00001d042840_P001	Maize	plastid	68.35	56.99
HORVU3Hr1G085270.8	Barley	plastid	67.09	53.0
KRH31099	Soybean	peroxisome	22.15	38.67
Bra014005.1-P	Field mustard	cytosol	20.57	19.29
Bra005526.1-P	Field mustard	cytosol	17.09	18.88
Bra014841.1-P	Field mustard	plastid	23.1	17.72
Bra007041.1-P	Field mustard	plastid	22.78	17.39
Bra024291.1-P	Field mustard	plastid	20.25	15.76

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:1.2.8
Gene3D:3.30.540.10	Gene3D:3.40.190.80	EnsemblPlantsGene:Bra003221	EnsemblPlants:Bra003221.1	EnsemblPlants:Bra003221.1-P	InterPro:FBPase_N
InterPro:FBPase_class-1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	UniProt:M4CG88	PFAM:PF00316
PIRSF:PIRSF000904	PRINTS:PR01958	PANTHER:PTHR11556	PANTHER:PTHR11556:SF2	InterPro:SBPase	SUPFAM:SSF56655
UniParc:UPI00025414BA	SEG:seg	:	:	:	:

Description

AT3G55800 (E=3e-144) SBPASE | SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase

Coordinates

chrA07:+:11990676..11992323

Molecular Weight (calculated)

34232.8 Da

IEP (calculated)

5.441

GRAVY (calculated)

-0.131

Length

316 amino acids

Sequence
(BLAST)

001: METSVISYSR GILLPSVSSQ RSSTLVSPPS SFSASSSFKQ RLKSSSIFGD SLRLTPRSQL KATKAKNNGA FTMTKCEIGQ SLEEFLTQAT PDKGLRTLLM
101: CMGEALRTIA FKVRTASCGG TACVNSFGDE QLAVDMLADK LLFEALQYSH VCKYACSEEV PELQDMGGPV EGGFSVAFDP LDGSSIVDTN FTVGTIFGVW
201: PGDKLTGVTG ADQVAAAMGI YGPRTTYVLA GKGFPGTHEF LLLDEGKWQH VKETTEINEG KMFSPGNLRA TFDNSEYSKL IDYYVKEKYT LRYTGGMVPD
301: VNQVRSSLAL LLLNDT

Best Arabidopsis Sequence Match ( AT3G55800.1 )
(BLAST)

001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA

Arabidopsis Description

SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.