Factsheet for Bra007192.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55800.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27264	Canola	plastid	98.98	98.98
CDX72200	Canola	plastid	98.73	98.48
AT3G55800.1	Thale cress	plastid	95.42	95.42
Bra014720.1-P	Field mustard	plastid	94.91	94.67
Bra003221.1-P	Field mustard	plastid	73.79	91.77
VIT_13s0019g03350.t01	Wine grape	extracellular, plastid	81.93	81.93
PGSC0003DMT400069750	Potato	cytosol, extracellular, plastid	81.93	81.52
Solyc05g052600.2.1	Tomato	plastid	81.42	81.22
KRG97781	Soybean	nucleus, plastid	79.13	80.36
KRH31096	Soybean	plastid	78.88	80.1
GSMUA_Achr1P17270_001	Banana	plastid	78.37	78.17
EES01767	Sorghum	plastid	75.32	77.28
Os04t0234600-01	Rice	plastid	76.34	76.53
TraesCS3B01G398300.1	Wheat	plastid	75.83	75.83
TraesCS3D01G359900.2	Wheat	plastid, unclear	75.57	75.57
TraesCS3A01G367000.1	Wheat	plastid	75.57	75.57
Zm00001d042840_P001	Maize	plastid	72.77	75.46
HORVU3Hr1G085270.8	Barley	plastid	72.26	71.0
KRH31099	Soybean	peroxisome	25.7	55.8
Bra005526.1-P	Field mustard	cytosol	18.58	25.52
Bra014005.1-P	Field mustard	cytosol	21.37	24.93
Bra014841.1-P	Field mustard	plastid	25.19	24.03
Bra007041.1-P	Field mustard	plastid	25.19	23.91
Bra024291.1-P	Field mustard	plastid	22.14	21.43

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	MapMan:1.2.8
Gene3D:3.30.540.10	Gene3D:3.40.190.80	EnsemblPlantsGene:Bra007192	EnsemblPlants:Bra007192.1	EnsemblPlants:Bra007192.1-P	InterPro:FBPase_N
InterPro:FBPase_class-1	InterPro:Fructose_bisphosphatase_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0042578
UniProt:M4CSK0	HAMAP:MF_01855	PFAM:PF00316	PIRSF:PIRSF000904	PRINTS:PR01958	ScanProsite:PS00124
PANTHER:PTHR11556	PANTHER:PTHR11556:SF2	InterPro:SBPase	SUPFAM:SSF56655	UniParc:UPI0002542AA8	SEG:seg

Description

AT3G55800 (E=1e-202) SBPASE | SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase

Coordinates

chrA09:+:27872291..27874104

Molecular Weight (calculated)

42433.6 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.105

Length

393 amino acids

Sequence
(BLAST)

001: METSVTCYSR GVLLPRVSSQ RSSSLVSPPS FSTSSSFKGL KSSSIFGDSL RVAPRSQLKA TKAKSNGASS VTKCEIGQSL EEFLTQATPD KVLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGVTGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEINEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLVENAGG FSSDGHNSVL DKTIVNLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA

Best Arabidopsis Sequence Match ( AT3G55800.1 )
(BLAST)

001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA

Arabidopsis Description

SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.