CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g056530.1.1	Tomato	plastid	90.35	90.88
PGSC0003DMT400027988	Potato	cytosol	90.06	90.59
VIT_18s0072g00770.t01	Wine grape	cytosol	89.77	90.56
KRG91644	Soybean	cytosol	89.77	90.56
KRH35151	Soybean	cytosol	89.18	90.24
GSMUA_Achr8P07890_001	Banana	cytosol	88.3	88.56
PGSC0003DMT400061951	Potato	cytosol	87.72	88.24
Solyc04g071340.2.1	Tomato	cytosol, nucleus, plastid	87.43	87.94
Os01t0866400-01	Rice	cytosol, extracellular, plasma membrane	86.84	87.61
Bra005526.1-P	Field mustard	cytosol	73.1	87.41
KXG22100	Sorghum	cytosol	87.13	87.39
GSMUA_Achr1P17000_001	Banana	cytosol	86.26	87.02
CDY58803	Canola	cytosol	85.38	86.65
Bra014005.1-P	Field mustard	cytosol	85.09	86.35
AT1G43670.1	Thale cress	cytosol	85.96	86.22
KXG33753	Sorghum	cytosol	86.26	86.01
TraesCS1A01G273900.1	Wheat	cytosol	85.38	85.63
TraesCS1D01G274000.1	Wheat	cytosol	85.09	85.34
CDY19443	Canola	cytosol	80.7	85.19
TraesCS1B01G283600.1	Wheat	cytosol	84.8	85.04
CDY64046	Canola	cytosol	85.67	84.68
Zm00001d042727_P001	Maize	cytosol	84.8	84.55
HORVU1Hr1G074330.14	Barley	cytosol	84.5	84.01
TraesCS1D01G274200.2	Wheat	cytosol	83.63	83.87
TraesCS3B01G410400.1	Wheat	golgi	84.21	83.72
TraesCS3D01G370700.1	Wheat	cytosol	83.92	83.43
TraesCS3A01G377600.1	Wheat	cytosol	83.92	83.43
KRH43947	Soybean	cytosol	82.16	82.16
CDY17136	Canola	cytosol	84.5	80.73
Zm00001d010172_P004	Maize	cytosol	85.38	77.66
KRH10483	Soybean	cytosol	40.35	57.5
KRH49250	Soybean	nucleus, plastid	50.88	42.65
KRH00107	Soybean	nucleus, plastid	50.88	42.44
GSMUA_Achr5P26140_001	Banana	plastid	48.25	37.41
KRH42081	Soybean	plastid	38.3	32.75
KRH49837	Soybean	plastid	37.43	32.0
CDY67108	Canola	cytosol	69.88	27.16
KRH31096	Soybean	plastid	27.19	24.03
KRG97781	Soybean	nucleus, plastid	26.9	23.77
KRH31099	Soybean	peroxisome	11.7	22.1

Protein Annotations

KEGG:00010+3.1.3.11	KEGG:00030+3.1.3.11	KEGG:00051+3.1.3.11	KEGG:00680+3.1.3.11	KEGG:00710+3.1.3.11	EntrezGene:100807451
MapMan:3.1.2.3	MapMan:3.10.3	Gene3D:3.30.540.10	Gene3D:3.40.190.80	UniProt:A0A0R4J5J8	EMBL:ACUP02010200
InterPro:FBPase_N	InterPro:FBPase_class-1	InterPro:FBPtase	InterPro:Fructose_bisphosphatase_AS	EnsemblPlantsGene:GLYMA_16G168000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0042132	GO:GO:0042578	EnsemblPlants:KRH08703	ProteinID:KRH08703
ProteinID:KRH08703.1	ProteinID:KRH08704.1	HAMAP:MF_01855	PFAM:PF00316	PRINTS:PR00115	ScanProsite:PS00124
PANTHER:PTHR11556	PANTHER:PTHR11556:SF19	MetaCyc:PWY-5484	SUPFAM:SSF56655	UniParc:UPI000189D98C	:

Description

hypothetical protein

Coordinates

chr16:-:32784814..32790109

Molecular Weight (calculated)

37290.7 Da

IEP (calculated)

5.447

GRAVY (calculated)

-0.114

Length

342 amino acids

Sequence
(BLAST)

001: MDHSADAHRT DLMTITRFVL NEQSKHPESR GDFTILLSHI VLGCKFVCSA VSKAGLAKLI GLAGETNVQG EEQKKLDVLS NEVFIKALIS SGRTCILVSE
101: EDEEAIIVEP SKRGKYCVCF DPLDGSSNID CGVSIGTIFG VYALKDVHEP TIEDVLLPGK NMVAAGYCMY GSSCTLVLST GAGVNGFTLD PSLGEFILTH
201: PNIKIPKKGK IYSVNEGNAK NWDRPTATYV EKCKFPEDGS SPKSLRYIGS MVADVHRTLL YGGIFLYPAD KKSPNGKLRV LYEVFPMSFL MEQAGGQSFT
301: GKERALDLVP TKLHERSPIF LGSYDDVEEI KALYAAAEGE QE

Best Arabidopsis Sequence Match ( AT1G43670.1 )
(BLAST)

001: MDHAADAHRT DLMTITRFVL NEQSKYPESR GDFTILLSHI VLGCKFVCSA VNKAGLAKLI GLAGETNIQG EEQKKLDVLS NDVFVNALVS SGRTSVLVSE
101: EDEEATFVEP SKRGKYCVVF DPLDGSSNID CGVSIGTIFG IYTLDHTDEP TTADVLKPGN EMVAAGYCMY GSSCMLVLST GTGVHGFTLD PSLGEFILTH
201: PDIKIPNKGN IYSVNEGNAQ NWDGPTTKYV EKCKFPKDGS PAKSLRYVGS MVADVHRTLL YGGIFLYPAD KKSPNGKLRV LYEVFPMSFL MEQAGGQAFT
301: GKKRALDLVP EKIHERSPIF LGSYDDVEEI KALYAEEEKK N

Arabidopsis Description

CYFBPFructose-1,6-bisphosphatase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9MA79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.