Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G39330.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT4G39330.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033613.1-P | Field mustard | cytosol | 99.72 | 99.72 |
| CDY56752 | Canola | cytosol | 99.72 | 99.72 |
| AT4G39330.1 | Thale cress | cytosol | 91.67 | 91.67 |
| CDX76968 | Canola | cytosol | 82.5 | 82.96 |
| CDY13791 | Canola | cytosol | 82.22 | 82.68 |
| PGSC0003DMT400047475 | Potato | cytosol | 79.17 | 79.17 |
| VIT_04s0044g00210.t01 | Wine grape | cytosol | 78.61 | 78.83 |
| KRH59514 | Soybean | cytosol | 78.33 | 78.33 |
| KRH43378 | Soybean | cytosol | 76.39 | 77.25 |
| Solyc03g078440.2.1 | Tomato | cytosol | 77.5 | 71.36 |
| Solyc03g078430.1.1 | Tomato | extracellular, plastid, vacuole | 40.56 | 70.19 |
| CDY52519 | Canola | cytosol | 64.44 | 65.72 |
| CDX90391 | Canola | cytosol | 64.44 | 65.72 |
| CDY52520 | Canola | cytosol | 46.39 | 63.5 |
| CDX75688 | Canola | cytosol | 62.5 | 63.03 |
| CDX69348 | Canola | cytosol | 61.67 | 62.18 |
| CDX90392 | Canola | cytosol | 61.39 | 61.9 |
| EER98870 | Sorghum | cytosol | 16.11 | 59.18 |
| CDX69347 | Canola | cytosol | 58.61 | 58.29 |
| CDX75687 | Canola | cytosol | 58.33 | 58.01 |
| CDY63551 | Canola | cytosol | 10.56 | 56.72 |
| CDX72466 | Canola | cytosol | 51.11 | 51.54 |
| CDY49288 | Canola | cytosol | 50.83 | 51.26 |
| CDY46173 | Canola | cytosol | 51.67 | 50.96 |
| CDX99222 | Canola | cytosol | 51.39 | 50.55 |
| CDX69037 | Canola | cytosol | 50.0 | 50.42 |
| CDX75413 | Canola | cytosol | 50.0 | 50.42 |
| CDX72936 | Canola | cytosol | 47.5 | 48.72 |
| CDY72501 | Canola | cytosol | 23.33 | 44.92 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.1 | GO:A0A078C940 | InterPro:ADH_C | InterPro:ADH_N |
| InterPro:ADH_Zn_CS | EnsemblPlants:CDX72704 | ProteinID:CDX72704 | ProteinID:CDX72704.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00100296001 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER |
| ScanProsite:PS00059 | PANTHER:PTHR42683 | PANTHER:PTHR42683:SF12 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 |
| UniParc:UPI0001890A52 | SEG:seg | : | : | : | : |
Description
BnaC07g47260D
Coordinates
chrLK031796:-:2747957..2749684
Molecular Weight (calculated)
38878.9 Da
IEP (calculated)
6.595
GRAVY (calculated)
-0.080
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSPETEHP NKAFGWAAKD KSGVLTPFHF SRRDNGDNDV TVKILYCGVC HTDLHTIKND WGFSYYPVVP GHEIVGIATK VGKNVTKFRE GDRVGVGVIT
101: GSCQSCESCN QDLENYCPQM SFTYNSIGSD GTKTYGGYSE SIVVDQRFVL QFPEGLPSDS GAPLLCAGIT VYSPMKYYGM TEPGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSPSKE DEAINRLGAD SFLVSSDPQK MKAAIGTMDY IIDTVSAVHA LFPLLGLLKV NGKLVTLGLP EKPLELPIFP LVLGRKMVGG
301: SDIGGMKETQ EMLEFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP
101: GSCQSCESCN QDLENYCPQM SFTYNSIGSD GTKTYGGYSE SIVVDQRFVL QFPEGLPSDS GAPLLCAGIT VYSPMKYYGM TEPGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSPSKE DEAINRLGAD SFLVSSDPQK MKAAIGTMDY IIDTVSAVHA LFPLLGLLKV NGKLVTLGLP EKPLELPIFP LVLGRKMVGG
301: SDIGGMKETQ EMLEFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP
001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP
Arabidopsis Description
CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.