Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G34230.1 | CDY15876 | AT2G21660.1 | 21798944 |
| AT4G34230.1 | CDY59763 | AT2G21660.1 | 21798944 |
| AT4G34230.1 | CDY70933 | AT2G21660.1 | 21798944 |
| AT4G34230.1 | CDY72366 | AT2G21660.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017639.1-P | Field mustard | cytosol | 99.72 | 99.72 |
| CDX72466 | Canola | cytosol | 99.72 | 99.72 |
| CDX69037 | Canola | cytosol | 95.24 | 95.24 |
| CDX75413 | Canola | cytosol | 94.68 | 94.68 |
| AT4G34230.1 | Thale cress | cytosol | 93.84 | 93.84 |
| VIT_03s0180g00260.t01 | Wine grape | cytosol | 79.55 | 79.55 |
| KRG91021 | Soybean | cytosol, nucleus | 78.43 | 78.43 |
| Solyc01g107590.2.1 | Tomato | cytosol, extracellular | 78.15 | 78.15 |
| PGSC0003DMT400066217 | Potato | cytosol | 77.87 | 77.87 |
| KRH35742 | Soybean | cytosol, nucleus | 77.87 | 77.65 |
| CDY46173 | Canola | cytosol | 78.71 | 76.99 |
| CDX99222 | Canola | cytosol | 78.43 | 76.5 |
| VIT_03s0180g00250.t01 | Wine grape | cytosol | 75.91 | 75.91 |
| TraesCS6B01G201600.1 | Wheat | cytosol | 75.07 | 74.44 |
| TraesCS6A01G173700.1 | Wheat | cytosol | 74.79 | 74.17 |
| TraesCS6D01G162800.1 | Wheat | cytosol | 74.51 | 73.89 |
| HORVU6Hr1G035420.6 | Barley | cytosol | 74.51 | 73.08 |
| GSMUA_Achr4P12970_001 | Banana | cytosol | 72.55 | 72.55 |
| GSMUA_Achr4P06150_001 | Banana | cytosol | 71.71 | 71.71 |
| Os02t0187800-01 | Rice | cytosol | 72.55 | 71.35 |
| KXG29649 | Sorghum | cytosol | 72.83 | 71.23 |
| Zm00001d015618_P001 | Maize | extracellular | 73.11 | 71.12 |
| CDY56752 | Canola | cytosol | 51.54 | 51.11 |
| CDX72704 | Canola | cytosol | 51.26 | 50.83 |
| CDY52519 | Canola | cytosol | 48.46 | 49.01 |
| CDX90391 | Canola | cytosol | 48.18 | 48.73 |
| CDX69348 | Canola | cytosol | 47.06 | 47.06 |
| CDX76968 | Canola | cytosol | 47.06 | 46.93 |
| CDX75688 | Canola | cytosol | 46.78 | 46.78 |
| CDX69347 | Canola | cytosol | 47.34 | 46.69 |
| CDX90392 | Canola | cytosol | 46.5 | 46.5 |
| CDY13791 | Canola | cytosol | 46.5 | 46.37 |
| CDX75687 | Canola | cytosol | 46.78 | 46.13 |
| CDX72936 | Canola | cytosol | 44.54 | 45.3 |
| CDY52520 | Canola | cytosol | 33.33 | 45.25 |
| CDY72501 | Canola | cytosol | 23.25 | 44.38 |
| CDY63551 | Canola | cytosol | 8.12 | 43.28 |
Protein Annotations
| MapMan:21.6.1.8 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | GO:A0A078IJN8 | UniProt:A0A078IJN8 | InterPro:ADH_C |
| InterPro:ADH_N | InterPro:ADH_Zn_CS | EnsemblPlants:CDY49288 | ProteinID:CDY49288 | ProteinID:CDY49288.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 |
| GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00092703001 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 |
| PFAM:PF08240 | InterPro:PKS_ER | ScanProsite:PS00059 | PANTHER:PTHR42683 | PANTHER:PTHR42683:SF1 | SMART:SM00829 |
| SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI0004EF39B0 | SEG:seg | : | : |
Description
BnaA03g51010DBnaA03g51010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJN8]
Coordinates
chrLK032822:-:106720..108875
Molecular Weight (calculated)
38878.3 Da
IEP (calculated)
5.783
GRAVY (calculated)
-0.029
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKMEVERKT TGWAARDPSG LLSPYTYTLR ETGPEDVHIR IICCGICHTD LHQTKNDLGM SNYPMVPGHE VVGEVVEVGS DVSKFTAGDI VGVGCLVGCC
101: GGCSPCERDL EQYCPKKIWS YNDVYIDGQP TQGGFARATV VHQKFVVKIP EGMAVEQAAP LLCAGVTVYS PLAHFGLKRP GLRGGILGLG GVGHMGVKIA
201: KAMGHHVTVI SSSNKKKEEA LKDLGADDYV IGSDQSKMNE LADSMDYIID TVPVHHALEP YLSLLRLDGK LILMGVISNP LQFLTPMVML GEKVITGSFI
301: GSMKETEEML EFCKEKGLSS IIEVVKMDYV NTAFERLEKN DVRYRFVVDV EGSKLEA
101: GGCSPCERDL EQYCPKKIWS YNDVYIDGQP TQGGFARATV VHQKFVVKIP EGMAVEQAAP LLCAGVTVYS PLAHFGLKRP GLRGGILGLG GVGHMGVKIA
201: KAMGHHVTVI SSSNKKKEEA LKDLGADDYV IGSDQSKMNE LADSMDYIID TVPVHHALEP YLSLLRLDGK LILMGVISNP LQFLTPMVML GEKVITGSFI
301: GSMKETEEML EFCKEKGLSS IIEVVKMDYV NTAFERLEKN DVRYRFVVDV EGSKLEA
001: MGIMEAERKT TGWAARDPSG ILSPYTYTLR ETGPEDVNIR IICCGICHTD LHQTKNDLGM SNYPMVPGHE VVGEVVEVGS DVSKFTVGDI VGVGCLVGCC
101: GGCSPCERDL EQYCPKKIWS YNDVYINGQP TQGGFAKATV VHQKFVVKIP EGMAVEQAAP LLCAGVTVYS PLSHFGLKQP GLRGGILGLG GVGHMGVKIA
201: KAMGHHVTVI SSSNKKREEA LQDLGADDYV IGSDQAKMSE LADSLDYVID TVPVHHALEP YLSLLKLDGK LILMGVINNP LQFLTPLLML GEKVITGSFI
301: GSMKETEEML EFCKEKGLSS IIEVVKMDYV NTAFERLEKN DVRYRFVVDV EGSNLDA
101: GGCSPCERDL EQYCPKKIWS YNDVYINGQP TQGGFAKATV VHQKFVVKIP EGMAVEQAAP LLCAGVTVYS PLSHFGLKQP GLRGGILGLG GVGHMGVKIA
201: KAMGHHVTVI SSSNKKREEA LQDLGADDYV IGSDQAKMSE LADSLDYVID TVPVHHALEP YLSLLKLDGK LILMGVINNP LQFLTPLLML GEKVITGSFI
301: GSMKETEEML EFCKEKGLSS IIEVVKMDYV NTAFERLEKN DVRYRFVVDV EGSNLDA
Arabidopsis Description
CAD5Cinnamyl alcohol dehydrogenase 5 [Source:UniProtKB/Swiss-Prot;Acc:O49482]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.