Factsheet for Os02t0187800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0670700-01
Os12t0632000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34230.1	Os03t0670700-01	AT2G21660.1	21798944
AT4G34230.1	Os12t0632000-01	AT2G21660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G201600.1	Wheat	cytosol	87.88	88.61
TraesCS6A01G173700.1	Wheat	cytosol	87.88	88.61
TraesCS6D01G162800.1	Wheat	cytosol	87.33	88.06
HORVU6Hr1G035420.6	Barley	cytosol	88.15	87.91
Zm00001d015618_P001	Maize	extracellular	88.71	87.74
KXG29649	Sorghum	cytosol	87.33	86.85
GSMUA_Achr4P12970_001	Banana	cytosol	78.51	79.83
GSMUA_Achr4P06150_001	Banana	cytosol	77.96	79.27
VIT_03s0180g00260.t01	Wine grape	cytosol	77.14	78.43
PGSC0003DMT400066217	Potato	cytosol	75.48	76.75
Solyc01g107590.2.1	Tomato	cytosol, extracellular	75.21	76.47
VIT_03s0180g00250.t01	Wine grape	cytosol	74.1	75.35
Bra022425.1-P	Field mustard	cytosol	75.48	75.07
CDY46173	Canola	cytosol	75.48	75.07
CDX99222	Canola	cytosol	75.48	74.86
AT4G34230.1	Thale cress	cytosol	72.45	73.67
KRG91021	Soybean	cytosol, nucleus	71.9	73.11
KRH35742	Soybean	cytosol, nucleus	71.9	72.91
Bra017639.1-P	Field mustard	cytosol	71.63	72.83
CDX72466	Canola	cytosol	71.63	72.83
CDY49288	Canola	cytosol	71.35	72.55
AT3G19450.1	Thale cress	cytosol	72.73	72.33
Bra011510.1-P	Field mustard	cytosol	71.07	72.27
CDX69037	Canola	cytosol	71.07	72.27
CDX75413	Canola	cytosol	70.8	71.99
Os09t0400400-01	Rice	cytosol	52.07	52.21
Os09t0399800-01	Rice	cytosol	51.52	52.09
Os09t0400300-01	Rice	plasma membrane	46.56	48.56
Os10t0430200-01	Rice	cytosol	47.11	46.72
Os08t0270400-00	Rice	cytosol	39.12	46.71
Os04t0229100-01	Rice	cytosol	45.73	46.11
Os03t0223200-00	Rice	cytosol	46.01	43.72
Os04t0612700-01	Rice	cytosol	45.45	43.54
Os10t0194200-01	Rice	plasma membrane, plastid	42.42	43.5
Os11t0622800-00	Rice	cytosol	41.32	42.37
Os09t0400000-00	Rice	plasma membrane	49.86	41.51

Protein Annotations

MapMan:21.6.1.8	Gene3D:3.40.50.720	Gene3D:3.90.180.10	EntrezGene:4328552	EMBL:AB122054	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AK105011	ProteinID:BAD15428.1	ProteinID:BAD15519.1	ProteinID:BAF08046.1
ProteinID:BAS77369.1	ProteinID:BAS77370.1	ProteinID:DAA02237.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009699	GO:GO:0009809
GO:GO:0009987	GO:GO:0016491	GO:GO:0019748	GO:GO:0045551	GO:GO:0046872	GO:GO:0052747
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os02g0187800	EnsemblPlants:Os02t0187800-01	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF1	UniProt:Q6ZHS4
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0000358A49	RefSeq:XP_015626408.1	SEG:seg

Description

GOLD HULL AND INTERNODE 2Cinnamyl-alcohol dehydrogenase, Lignin biosynthesis, Monolignol biosynthesis (Os02t0187800-01);Similar to Cinnamyl alcohol dehydrogenase 1a. (Os02t0187800-02)

Coordinates

chr2:-:4870151..4874038

Molecular Weight (calculated)

38645.8 Da

IEP (calculated)

6.368

GRAVY (calculated)

0.090

Length

363 amino acids

Sequence
(BLAST)

001: MGSLAAEKTV TGWAARDASG HLTPYNYTLR KTGPEDVVVK VLYCGICHTD IHQAKNHLGA SKYPMVPGHE VVGEVVEVGP EVTKYSAGDV VGVGVIVGCC
101: RECHPCKANV EQYCNKRIWS YNDVYTDGRP TQGGFASAMV VDQKFVVKIP AGLAPEQAAP LLCAGLTVYS PLKHFGLMSP GLRGGVLGLG GVGHMGVKVA
201: KSMGHHVTVI SSSARKRGEA MDDLGADAYL VSSDAAAMAA AGDSLDYIID TVPVHHPLEP YLALLKLDGK LILMGVINQP LSFISPMVML GRKAITGSFI
301: GSMAETEEVL NFCVDKGLTS QIEVVKMDYV NQALERLERN DVRYRFVVDV AGSNIDDADA PPA

Best Arabidopsis Sequence Match ( AT3G19450.1 )
(BLAST)

001: MGSVEAGEKK ALGWAARDPS GVLSPYSYTL RSTGADDVYI KVICCGICHT DIHQIKNDLG MSNYPMVPGH EVVGEVLEVG SDVSKFTVGD VVGVGVVVGC
101: CGSCKPCSSE LEQYCNKRIW SYNDVYTDGK PTQGGFADTM IVNQKFVVKI PEGMAVEQAA PLLCAGVTVY SPLSHFGLMA SGLKGGILGL GGVGHMGVKI
201: AKAMGHHVTV ISSSDKKKEE AIEHLGADDY VVSSDPAEMQ RLADSLDYII DTVPVFHPLD PYLACLKLDG KLILMGVINT PLQFVTPLVI LGRKVISGSF
301: IGSIKETEEV LAFCKEKGLT STIETVKIDE LNIAFERLRK NDVRYRFVVD VAGSNLVEEA ATTTN

Arabidopsis Description

CAD4Cinnamyl alcohol dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P48523]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.