Factsheet for Bra011510.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra030284.1-P
Bra031210.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34230.1	Bra030284.1-P	AT2G21660.1	21798944
AT4G34230.1	Bra031210.1-P	AT2G21660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75413	Canola	cytosol	98.6	98.6
Bra017639.1-P	Field mustard	cytosol	94.12	94.12
AT4G34230.1	Thale cress	cytosol	93.0	93.0
VIT_03s0180g00260.t01	Wine grape	cytosol	79.27	79.27
Solyc01g107590.2.1	Tomato	cytosol, extracellular	78.15	78.15
KRG91021	Soybean	cytosol, nucleus	77.59	77.59
PGSC0003DMT400066217	Potato	cytosol	77.59	77.59
KRH35742	Soybean	cytosol, nucleus	77.31	77.09
VIT_03s0180g00250.t01	Wine grape	cytosol	76.19	76.19
Bra022425.1-P	Field mustard	cytosol	77.31	75.62
TraesCS6B01G201600.1	Wheat	cytosol	73.95	73.33
HORVU6Hr1G035420.6	Barley	cytosol	74.51	73.08
TraesCS6A01G173700.1	Wheat	cytosol	73.67	73.06
TraesCS6D01G162800.1	Wheat	cytosol	73.39	72.78
GSMUA_Achr4P12970_001	Banana	cytosol	71.99	71.99
KXG29649	Sorghum	cytosol	73.11	71.51
Zm00001d015618_P001	Maize	extracellular	73.39	71.39
GSMUA_Achr4P06150_001	Banana	cytosol	71.15	71.15
Os02t0187800-01	Rice	cytosol	72.27	71.07
Bra033613.1-P	Field mustard	cytosol	51.26	50.83
Bra010627.1-P	Field mustard	cytosol	46.78	49.55
Bra011799.1-P	Field mustard	cytosol	47.9	47.9
Bra010626.1-P	Field mustard	cytosol	45.38	46.82
Bra031216.1-P	Field mustard	cytosol	46.78	46.65
Bra011798.1-P	Field mustard	cytosol	47.06	46.41
Bra010625.1-P	Field mustard	cytosol	32.77	45.53
Bra016041.1-P	Field mustard	cytosol	44.82	45.2

Protein Annotations

MapMan:21.6.1.8	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
EnsemblPlantsGene:Bra011510	EnsemblPlants:Bra011510.1	EnsemblPlants:Bra011510.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	UniProt:M4D4V3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF1	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI00025458C7	SEG:seg	:	:	:	:

Description

AT4G34230 (E=2e-159) CAD5, ATCAD5, CAD-5 | ATCAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5); cinnamyl-alcohol dehydrogenase

Coordinates

chrA01:+:1880960..1882770

Molecular Weight (calculated)

39137.6 Da

IEP (calculated)

6.371

GRAVY (calculated)

-0.049

Length

357 amino acids

Sequence
(BLAST)

001: MRRMEVERKT IGWAARDPSG ILSPYTYTLR ETGPEDVHIR IICCGICHTD LHHTKNDLGT SNYPMVPGHE VVGEVVEVGS GVSKFTVGDI VGVGCLVGCC
101: GGCSPCERDL EQYCPKKIWS YNDVYIDGQP TQGGFAKATV VHQKFVVKIP EGMAVEQAAP LLCAGVTVYS PLSHFGLKKP GLRGGILGLG GVGHMGVKFA
201: KAMGHHVTVI SSSNKKREEA LQDLGADDYV IGSDQSKMNE LADSMDYIID TVPVHHALEP YLSLLRLDGK LILMGVINNP LQFLSPMVMI GRKMITGSFI
301: GSMKETEEML EFWKEKGLSS IIEVVKMDYV NTALERLEKN DVRYRFVVDV EGSRLEA

Best Arabidopsis Sequence Match ( AT4G34230.1 )
(BLAST)

001: MGIMEAERKT TGWAARDPSG ILSPYTYTLR ETGPEDVNIR IICCGICHTD LHQTKNDLGM SNYPMVPGHE VVGEVVEVGS DVSKFTVGDI VGVGCLVGCC
101: GGCSPCERDL EQYCPKKIWS YNDVYINGQP TQGGFAKATV VHQKFVVKIP EGMAVEQAAP LLCAGVTVYS PLSHFGLKQP GLRGGILGLG GVGHMGVKIA
201: KAMGHHVTVI SSSNKKREEA LQDLGADDYV IGSDQAKMSE LADSLDYVID TVPVHHALEP YLSLLKLDGK LILMGVINNP LQFLTPLLML GRKVITGSFI
301: GSMKETEEML EFCKEKGLSS IIEVVKMDYV NTAFERLEKN DVRYRFVVDV EGSNLDA

Arabidopsis Description

CAD5Cinnamyl alcohol dehydrogenase 5 [Source:UniProtKB/Swiss-Prot;Acc:O49482]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.