Factsheet for Bra016041.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72501	Canola	cytosol	50.28	95.19
AT1G72680.1	Thale cress	cytosol	87.85	87.61
VIT_02s0025g03100.t01	Wine grape	cytosol	76.84	76.62
KRH10632	Soybean	cytosol	74.86	74.23
KRH21722	Soybean	cytosol	74.29	73.67
TraesCS3B01G485000.1	Wheat	cytosol	72.6	72.6
HORVU3Hr1G097140.1	Barley	cytosol	72.88	72.47
TraesCS3A01G448800.1	Wheat	cytosol	71.47	71.07
TraesCS3B01G484500.1	Wheat	cytosol	70.9	70.9
TraesCS3A01G448400.1	Wheat	cytosol	70.9	70.9
Zm00001d045043_P001	Maize	cytosol	70.62	70.62
GSMUA_Achr1P00850_001	Banana	cytosol	71.19	70.59
HORVU3Hr1G097160.1	Barley	cytosol	70.34	70.34
GSMUA_Achr4P26450_001	Banana	cytosol	70.62	69.83
Os10t0194200-01	Rice	plasma membrane, plastid	69.77	69.77
TraesCS3D01G440900.1	Wheat	cytosol	71.19	69.23
EER88001	Sorghum	cytosol	69.21	69.21
Os11t0622800-00	Rice	cytosol	69.21	69.21
OQU75993	Sorghum	cytosol	69.21	69.21
EER88002	Sorghum	cytosol	68.93	68.93
HORVU3Hr1G097060.1	Barley	cytosol, plastid	28.25	65.36
VIT_02s0025g03110.t01	Wine grape	cytosol	14.12	64.94
PGSC0003DMT400012845	Potato	cytosol	69.77	64.32
OQU79199	Sorghum	cytosol	58.47	64.29
Solyc08g048300.1.1	Tomato	cytosol	16.1	61.96
TraesCS3D01G441200.1	Wheat	extracellular, golgi	72.03	59.86
KXG19525	Sorghum	cytosol	68.93	58.37
Bra033613.1-P	Field mustard	cytosol	50.28	49.44
Bra010627.1-P	Field mustard	cytosol	45.2	47.48
Bra011799.1-P	Field mustard	cytosol	47.74	47.34
Bra031216.1-P	Field mustard	cytosol	47.74	47.21
Bra010625.1-P	Field mustard	cytosol	34.18	47.08
Solyc12g055820.1.1	Tomato	cytosol	70.06	47.06
Bra011798.1-P	Field mustard	cytosol	48.02	46.96
Bra010626.1-P	Field mustard	cytosol	45.2	46.24
Bra017639.1-P	Field mustard	cytosol	46.33	45.94
Bra011510.1-P	Field mustard	cytosol	45.2	44.82
OQU75994	Sorghum	cytosol	22.03	43.58
Bra022425.1-P	Field mustard	cytosol	44.07	42.74
Zm00001d002250_P001	Maize	plastid	67.51	7.63

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
EnsemblPlantsGene:Bra016041	EnsemblPlants:Bra016041.1	EnsemblPlants:Bra016041.1-P	InterPro:D-isomer_DH_CS1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009809	GO:GO:0009987
GO:GO:0016491	GO:GO:0019748	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M4DHR4
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	ScanProsite:PS00065
PANTHER:PTHR42683	PANTHER:PTHR42683:SF17	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002541C48
SEG:seg	:	:	:	:	:

Description

AT1G72680 (E=2e-179) ATCAD1, CAD1 | cinnamyl-alcohol dehydrogenase, putative

Coordinates

chrA07:-:19708127..19709603

Molecular Weight (calculated)

38234.9 Da

IEP (calculated)

7.325

GRAVY (calculated)

-0.004

Length

354 amino acids

Sequence
(BLAST)

001: MSSSGGDECL SWAARDPSGL LSPHTFTRRS VTSDDVSLKI THCGVCYADV IWTKNKHGDS KYPLVPGHEI AGVVNKVGSN VTRFKVGDHV GVGTFVNSCR
101: ECDYCDEGQE VSCVKGQVFT FNGVDYDGSV TKGGYSSHIV VHERYCYKIP VDYPLESAAP LLCAGVTVYA PMVRHSMNQP GKSLGVVGLG GLGHMAVKFG
201: KAFGLHVTVF STSVSKKEEA LNLLGANNFV ISSDHDQMKA LAKSLDFIID TASGDHAFDP YMSLLKIAGT YVLVGFPSEI KIQPATLNLG MRVLAGSVSG
301: GTKVTQEMID FCAAHKIYPN IEVIPIQKAN EAIERVVKKD IKYRFVIDIE NSLK

Best Arabidopsis Sequence Match ( AT1G72680.1 )
(BLAST)

001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

Arabidopsis Description

CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.