Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72501 | Canola | cytosol | 59.48 | 48.66 |
| OQU75994 | Sorghum | cytosol | 56.21 | 48.04 |
| HORVU3Hr1G097160.1 | Barley | cytosol | 96.08 | 41.53 |
| TraesCS3B01G484500.1 | Wheat | cytosol | 94.12 | 40.68 |
| TraesCS3A01G448400.1 | Wheat | cytosol | 93.46 | 40.4 |
| TraesCS3D01G440900.1 | Wheat | cytosol | 93.46 | 39.29 |
| HORVU3Hr1G097140.1 | Barley | cytosol | 86.93 | 37.36 |
| HORVU6Hr1G035410.1 | Barley | cytosol | 14.38 | 35.48 |
| Os10t0194200-01 | Rice | plasma membrane, plastid | 78.43 | 33.9 |
| EER88001 | Sorghum | cytosol | 76.47 | 33.05 |
| Zm00001d045043_P001 | Maize | cytosol | 76.47 | 33.05 |
| OQU75993 | Sorghum | cytosol | 75.16 | 32.49 |
| EER88002 | Sorghum | cytosol | 74.51 | 32.2 |
| Os11t0622800-00 | Rice | cytosol | 73.2 | 31.64 |
| VIT_02s0025g03100.t01 | Wine grape | cytosol | 69.93 | 30.14 |
| HORVU2Hr1G099360.1 | Barley | cytosol | 13.73 | 28.77 |
| Bra016041.1-P | Field mustard | cytosol | 65.36 | 28.25 |
| GSMUA_Achr4P26450_001 | Banana | cytosol | 65.36 | 27.93 |
| KXG19525 | Sorghum | cytosol | 75.82 | 27.75 |
| AT1G72680.1 | Thale cress | cytosol | 64.05 | 27.61 |
| KRH10632 | Soybean | cytosol | 64.05 | 27.45 |
| KRH21722 | Soybean | cytosol | 63.4 | 27.17 |
| VIT_00s0174g00280.t01 | Wine grape | extracellular | 63.4 | 27.02 |
| GSMUA_Achr1P00850_001 | Banana | cytosol | 62.75 | 26.89 |
| CDX72936 | Canola | cytosol | 60.78 | 26.5 |
| PGSC0003DMT400012845 | Potato | cytosol | 63.4 | 25.26 |
| VIT_00s0174g00270.t01 | Wine grape | cytosol | 58.82 | 25.21 |
| HORVU7Hr1G079380.2 | Barley | cytosol | 47.06 | 19.35 |
| HORVU6Hr1G087220.1 | Barley | cytosol | 44.44 | 18.53 |
| HORVU5Hr1G062030.9 | Barley | cytosol | 46.41 | 18.44 |
| HORVU2Hr1G010840.1 | Barley | peroxisome | 43.14 | 18.44 |
| Solyc12g055820.1.1 | Tomato | cytosol | 63.4 | 18.41 |
| HORVU0Hr1G012940.6 | Barley | cytosol | 45.1 | 17.51 |
| HORVU1Hr1G007800.1 | Barley | cytosol | 41.18 | 17.12 |
| HORVU0Hr1G012860.2 | Barley | plastid | 47.06 | 17.1 |
| HORVU2Hr1G010830.1 | Barley | peroxisome | 43.79 | 15.62 |
| HORVU6Hr1G035420.6 | Barley | cytosol | 36.6 | 15.38 |
| HORVU6Hr1G032760.3 | Barley | cytosol | 28.1 | 14.38 |
| Zm00001d002250_P001 | Maize | plastid | 70.59 | 3.45 |
| HORVU2Hr1G099350.2 | Barley | cytosol, mitochondrion | 7.84 | 2.99 |
| VIT_02s0025g03110.t01 | Wine grape | cytosol | 0.65 | 1.3 |
| Solyc08g048300.1.1 | Tomato | cytosol | 0.65 | 1.09 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G097060.1 | EnsemblPlantsGene:HORVU3Hr1G097060 | Gene3D:3.90.180.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0055114 | InterPro:ADH_N |
| InterPro:ADH_Zn_CS | InterPro:GroES-like_sf | PANTHER:PTHR42683 | PANTHER:PTHR42683:SF17 | PFAM:PF08240 | ScanProsite:PS00059 |
| SEG:seg | SUPFAM:SSF50129 | UniParc:UPI000B47E62D | UniProt:A0A287MFS4 | MapMan:50.1.1 | : |
Description
No Description!
Coordinates
chrchr3H:-:655144010..655144976
Molecular Weight (calculated)
16838.7 Da
IEP (calculated)
6.326
GRAVY (calculated)
-0.107
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAESESCNC SAWAAKDPSG VLSPHSFNRR AVRHDDVSLR ITHCGVCFAD VQWTRNLHHD SVYPLVPGHE IAGVVTEVGS DVKGFKLGDH VAVGTYINSC
101: RDCDNCNSLL ENHCSNFVFT FNGVDTDGTV TKGGYSTHIV VHERYGCILF WMF
101: RDCDNCNSLL ENHCSNFVFT FNGVDTDGTV TKGGYSTHIV VHERYGCILF WMF
001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK
Arabidopsis Description
CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.