Factsheet for VIT_02s0025g03110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 4
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g048300.1.1	Tomato	cytosol	45.45	38.04
VIT_00s0174g00220.t01	Wine grape	golgi	68.83	28.96
VIT_02s0025g03100.t01	Wine grape	cytosol	89.61	19.44
VIT_18s0001g01160.t01	Wine grape	mitochondrion	40.26	19.25
KRH10632	Soybean	cytosol	72.73	15.69
KRH21722	Soybean	cytosol	70.13	15.13
VIT_00s0371g00040.t01	Wine grape	cytosol	44.16	15.11
AT1G72680.1	Thale cress	cytosol	68.83	14.93
PGSC0003DMT400012845	Potato	cytosol	74.03	14.84
GSMUA_Achr1P00850_001	Banana	cytosol	67.53	14.57
VIT_00s0371g00020.t01	Wine grape	cytosol	10.39	14.55
GSMUA_Achr4P26450_001	Banana	cytosol	67.53	14.53
OQU79199	Sorghum	cytosol	59.74	14.29
CDX72936	Canola	cytosol	64.94	14.24
Bra016041.1-P	Field mustard	cytosol	64.94	14.12
VIT_00s0174g00270.t01	Wine grape	cytosol	64.94	14.01
EER88001	Sorghum	cytosol	63.64	13.84
EER88002	Sorghum	cytosol	63.64	13.84
Zm00001d045043_P001	Maize	cytosol	62.34	13.56
TraesCS3A01G448800.1	Wheat	cytosol	62.34	13.48
OQU75993	Sorghum	cytosol	61.04	13.28
Os10t0194200-01	Rice	plasma membrane, plastid	59.74	12.99
TraesCS3B01G485000.1	Wheat	cytosol	59.74	12.99
TraesCS3B01G484500.1	Wheat	cytosol	59.74	12.99
TraesCS3A01G448400.1	Wheat	cytosol	58.44	12.71
Os11t0622800-00	Rice	cytosol	58.44	12.71
HORVU3Hr1G097160.1	Barley	cytosol	57.14	12.43
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	54.55	12.43
TraesCS3D01G440900.1	Wheat	cytosol	58.44	12.36
HORVU3Hr1G097140.1	Barley	cytosol	57.14	12.36
VIT_00s0371g00070.t01	Wine grape	cytosol	54.55	11.51
Solyc12g055820.1.1	Tomato	cytosol	75.32	11.01
KXG19525	Sorghum	cytosol	59.74	11.0
VIT_00s1389g00010.t01	Wine grape	cytosol	50.65	10.83
VIT_00s0615g00010.t01	Wine grape	cytosol	50.65	10.83
VIT_04s0044g00190.t01	Wine grape	cytosol	49.35	10.59
VIT_00s0346g00080.t01	Wine grape	cytosol	49.35	10.5
VIT_00s0371g00100.t01	Wine grape	cytosol	49.35	10.5
TraesCS3D01G441200.1	Wheat	extracellular, golgi	57.14	10.33
VIT_04s0044g00210.t01	Wine grape	cytosol	48.05	10.31
VIT_00s0346g00110.t01	Wine grape	cytosol	48.05	10.28
VIT_18s0001g14910.t01	Wine grape	cytosol	48.05	10.28
VIT_00s0371g00050.t01	Wine grape	cytosol	48.05	10.28
VIT_00s0615g00020.t01	Wine grape	cytosol	48.05	10.28
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	49.35	10.11
VIT_00s0346g00100.t01	Wine grape	cytosol	45.45	9.7
VIT_00s0346g00120.t01	Wine grape	cytosol	44.16	9.42
VIT_00s0615g00030.t01	Wine grape	cytosol	48.05	9.3
VIT_10s0003g04910.t01	Wine grape	cytosol	41.56	8.82
VIT_00s0174g00280.t01	Wine grape	extracellular	40.26	8.64
VIT_00s0218g00010.t01	Wine grape	cytosol	38.96	8.17
VIT_03s0180g00260.t01	Wine grape	cytosol	37.66	8.12
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	33.77	7.39
VIT_03s0180g00250.t01	Wine grape	cytosol	33.77	7.28
VIT_00s0371g00060.t01	Wine grape	cytosol	12.99	3.33
CDY72501	Canola	cytosol	6.49	2.67
OQU75994	Sorghum	cytosol	3.9	1.68
Zm00001d002250_P001	Maize	plastid	58.44	1.44
HORVU3Hr1G097060.1	Barley	cytosol, plastid	1.3	0.65
VIT_00s0371g00010.t01	Wine grape	cytosol	0.0	0.0
VIT_00s0174g00210.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_02s0025g03110	EMBL:FN596251	EnsemblPlants:VIT_02s0025g03110.t01	EnsemblPlantsGene:VIT_02s0025g03110	Gene3D:3.40.50.720	Gene3D:3.90.180.10
PANTHER:PTHR42683	PANTHER:PTHR42683:SF17	ProteinID:CCB58325	ProteinID:CCB58325.1	UniParc:UPI0002109E91	UniProt:F6HUA2
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:2643548..2644447

Molecular Weight (calculated)

8163.0 Da

IEP (calculated)

6.511

GRAVY (calculated)

0.023

Length

77 amino acids

Sequence
(BLAST)

1: MTVGVLVLVG SPSEAKSSPG NLVRGMRTVS GSATGGTKDI QEMLDFCAAH GIHPEIEVIP IQYANEALER LIKKDVK

Best Arabidopsis Sequence Match ( AT1G72680.1 )
(BLAST)

001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

Arabidopsis Description

CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.