Factsheet for VIT_00s0218g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0615g00020.t01	Wine grape	cytosol	92.1	93.89
VIT_00s0371g00010.t01	Wine grape	cytosol	16.35	85.71
VIT_00s0346g00110.t01	Wine grape	cytosol	82.29	83.89
VIT_00s0371g00050.t01	Wine grape	cytosol	82.29	83.89
VIT_00s0615g00010.t01	Wine grape	cytosol	82.02	83.61
VIT_00s1389g00010.t01	Wine grape	cytosol	81.74	83.33
VIT_00s0371g00020.t01	Wine grape	cytosol	12.26	81.82
VIT_00s0371g00060.t01	Wine grape	cytosol	66.76	81.67
VIT_00s0615g00030.t01	Wine grape	cytosol	88.01	81.16
VIT_00s0346g00100.t01	Wine grape	cytosol	77.66	78.95
VIT_00s0346g00120.t01	Wine grape	cytosol	76.84	78.12
VIT_00s0371g00100.t01	Wine grape	cytosol	74.93	75.97
VIT_00s0346g00080.t01	Wine grape	cytosol	74.39	75.41
VIT_00s0371g00040.t01	Wine grape	cytosol	43.87	71.56
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	71.66	69.95
VIT_04s0044g00190.t01	Wine grape	cytosol	62.4	63.79
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	58.31	63.31
VIT_04s0044g00210.t01	Wine grape	cytosol	59.67	61.0
VIT_10s0003g04910.t01	Wine grape	cytosol	59.95	60.61
Os08t0270400-00	Rice	cytosol	48.5	58.55
TraesCS7D01G184600.1	Wheat	cytosol	31.88	57.92
TraesCS5D01G210600.1	Wheat	cytosol	56.13	57.87
VIT_00s0371g00070.t01	Wine grape	cytosol	57.22	57.53
Zm00001d024314_P001	Maize	cytosol	56.13	57.38
TraesCS5A01G205700.1	Wheat	cytosol	55.59	57.3
TraesCS5B01G202700.1	Wheat	cytosol	55.31	57.02
TraesCS6A01G369800.1	Wheat	cytosol, golgi	56.13	56.44
TraesCS6B01G406300.1	Wheat	cytosol	56.13	56.44
TraesCS6B01G406000.1	Wheat	cytosol	56.13	56.28
TraesCS6D01G353300.1	Wheat	cytosol	55.59	55.89
OQU80077	Sorghum	cytosol	56.68	55.76
TraesCS6D01G353700.1	Wheat	cytosol	55.31	55.46
Os10t0430200-01	Rice	cytosol	55.31	55.46
TraesCS6D01G353400.1	Wheat	cytosol	55.59	55.43
TraesCS7A01G380100.1	Wheat	cytosol	55.59	55.43
TraesCS7D01G376600.1	Wheat	cytosol	55.59	55.43
Zm00001d020401_P001	Maize	cytosol	34.88	55.41
TraesCS7B01G282100.1	Wheat	cytosol	55.86	55.41
TraesCS6A01G370100.1	Wheat	cytosol	53.68	55.34
TraesCS7A01G350500.1	Wheat	cytosol	55.86	55.26
Os09t0400400-01	Rice	cytosol	54.5	55.25
TraesCS7A01G183000.1	Wheat	cytosol	53.68	55.18
Os09t0399800-01	Rice	cytosol	53.95	55.15
TraesCS5A01G213900.1	Wheat	plastid	58.31	55.01
EER96708	Sorghum	cytosol	53.95	55.0
TraesCS7B01G232400.1	Wheat	cytosol, plastid	56.4	54.91
TraesCS5B01G209800.2	Wheat	plastid	58.04	54.76
TraesCS6B01G406200.1	Wheat	cytosol	54.5	54.64
TraesCS7D01G184500.1	Wheat	cytosol	53.13	54.62
EER98869	Sorghum	cytosol	53.41	54.14
TraesCS5D01G218100.2	Wheat	plastid	57.22	54.12
VIT_18s0001g14910.t01	Wine grape	cytosol	52.86	53.89
Os09t0400300-01	Rice	plasma membrane	50.95	53.74
Zm00001d020400_P001	Maize	plastid	53.13	53.42
TraesCS2D01G422400.1	Wheat	cytosol	53.13	52.99
Zm00001d002346_P002	Maize	plastid	53.41	52.97
TraesCS2B01G444200.2	Wheat	cytosol	52.86	52.57
TraesCS2A01G424600.1	Wheat	cytosol	52.59	52.3
Os04t0612700-01	Rice	cytosol	53.13	51.45
OQU82308	Sorghum	cytosol	53.13	51.32
VIT_03s0180g00260.t01	Wine grape	cytosol	49.59	50.98
Os03t0223200-00	Rice	cytosol	52.32	50.26
TraesCS7D01G328300.1	Wheat	cytosol	56.13	50.24
TraesCS5B01G202800.1	Wheat	plastid	57.49	50.12
TraesCS5D01G210700.1	Wheat	plastid	56.95	49.64
TraesCS5A01G205600.1	Wheat	plastid	56.95	49.53
OQU89465	Sorghum	plastid	55.86	49.04
VIT_03s0180g00250.t01	Wine grape	cytosol	47.41	48.74
VIT_02s0025g03100.t01	Wine grape	cytosol	46.59	48.17
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	45.78	47.73
VIT_00s0174g00270.t01	Wine grape	cytosol	46.05	47.34
Os09t0400000-00	Rice	plasma membrane	55.86	47.02
VIT_00s0174g00220.t01	Wine grape	golgi	23.16	46.45
VIT_00s0174g00210.t01	Wine grape	cytosol	16.35	45.11
VIT_00s0174g00280.t01	Wine grape	extracellular	42.23	43.18
VIT_18s0001g01160.t01	Wine grape	mitochondrion	17.44	39.75
VIT_02s0025g03110.t01	Wine grape	cytosol	8.17	38.96
Zm00001d020402_P001	Maize	plastid	11.72	35.25

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
EMBL:AM429495	ProteinID:CAN80210	ProteinID:CAN80210.1	ProteinID:CCB62737	ProteinID:CCB62737.1	UniProt:F6I719
EMBL:FN596763	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF23
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000210A544	ArrayExpress:VIT_00s0218g00010	EnsemblPlantsGene:VIT_00s0218g00010
EnsemblPlants:VIT_00s0218g00010.t01	RefSeq:XP_003635101	RefSeq:XP_003635101.1	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:+:13915095..13917298

Molecular Weight (calculated)

39519.7 Da

IEP (calculated)

6.780

GRAVY (calculated)

-0.047

Length

367 amino acids

Sequence
(BLAST)

001: MAKSPEQEHP TKAFGWAASD PSGVLSPFKF SRRATGEKDV RFKVLYCGIC HSDLHMLKNE WGFSTYPLVP GHEIVGIVTE VGSKVEKLEV GDKVGVGCLV
101: GACHSCDNCA NDLENYCPKN ILTYGATYYD GTTTYGGYSD VMVAEERYVV RFPENLPLDA GAPLLCAGIT VYSPLQHFGF TKPGMHIGVV GLGGLGHVAV
201: KFAKAFGVKV TVISTSTSKK KEATEHLGAD SFLVSRDPDQ MQAALGTMDG IIDTVSAVHP LLPLIDLLKS HGKLVMVGAP NRPLELPIFP LLMGRKIVAG
301: SNIGGMKETQ EMIDFAGKHN ITADVEVVPM DYVNTKHCIG ATGESRCQVP LRDRHWQHAE SCLGQGS

Best Arabidopsis Sequence Match ( AT2G21890.1 )
(BLAST)

001: MVDQNRAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTRNQG GYSDVIVVDH RFVLSIPDGL PSDSGAPLLC AGITVYSPMK YYGMTKESGK RLGVNGLGGL GHIAVKIGKA
201: FGLRVTVISR SSEKEREAID RLGADSFLVT TDSQKMKEAV GTMDFIIDTV SAEHALLPLF SLLKVSGKLV ALGLLEKPLD LPIFPLVLGR KMVGGSQIGG
301: MKETQEMLEF CAKHKIVSDI ELIKMSDINS AMDRLVKSDV RYRFVIDVAN SLLPESSAEI LTEHVDHGVS ITSRF

Arabidopsis Description

CAD3Cinnamyl alcohol dehydrogenase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.