Factsheet for VIT_00s0346g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0371g00100.t01	Wine grape	cytosol	98.62	98.62
VIT_00s0615g00020.t01	Wine grape	cytosol	80.11	80.56
VIT_00s0346g00110.t01	Wine grape	cytosol	79.83	80.28
VIT_00s0371g00050.t01	Wine grape	cytosol	79.83	80.28
VIT_00s0615g00010.t01	Wine grape	cytosol	79.28	79.72
VIT_00s1389g00010.t01	Wine grape	cytosol	79.01	79.44
VIT_00s0371g00010.t01	Wine grape	cytosol	14.92	77.14
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	79.83	76.86
VIT_00s0346g00100.t01	Wine grape	cytosol	75.97	76.18
VIT_00s0346g00120.t01	Wine grape	cytosol	75.69	75.9
VIT_00s0371g00060.t01	Wine grape	cytosol	62.15	75.0
VIT_00s0371g00040.t01	Wine grape	cytosol	46.41	74.67
VIT_00s0218g00010.t01	Wine grape	cytosol	75.41	74.39
VIT_00s0615g00030.t01	Wine grape	cytosol	79.28	72.11
VIT_04s0044g00190.t01	Wine grape	cytosol	69.89	70.47
VIT_00s0371g00020.t01	Wine grape	cytosol	10.5	69.09
VIT_04s0044g00210.t01	Wine grape	cytosol	67.68	68.25
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	63.54	68.05
AT4G37970.1	Thale cress	cytosol	67.4	67.22
TraesCS6B01G406000.1	Wheat	cytosol	67.96	67.21
Zm00001d024314_P001	Maize	cytosol	66.3	66.85
CDX69347	Canola	cytosol	66.85	66.85
TraesCS6A01G369800.1	Wheat	cytosol, golgi	67.4	66.85
TraesCS6B01G406300.1	Wheat	cytosol	67.13	66.58
Bra011798.1-P	Field mustard	cytosol	66.02	66.02
CDX75687	Canola	cytosol	66.02	66.02
TraesCS6D01G353700.1	Wheat	cytosol	66.57	65.85
TraesCS6D01G353300.1	Wheat	cytosol	66.3	65.75
TraesCS6A01G370100.1	Wheat	cytosol	63.81	64.89
TraesCS7A01G350500.1	Wheat	cytosol	66.3	64.69
TraesCS6D01G353400.1	Wheat	cytosol	65.75	64.67
TraesCS6B01G406200.1	Wheat	cytosol	65.19	64.48
OQU80077	Sorghum	cytosol	66.02	64.08
TraesCS7A01G380100.1	Wheat	cytosol	64.92	63.86
TraesCS7D01G376600.1	Wheat	cytosol	64.92	63.86
TraesCS7B01G282100.1	Wheat	cytosol	65.19	63.78
TraesCS7B01G232400.1	Wheat	cytosol, plastid	66.02	63.4
VIT_10s0003g04910.t01	Wine grape	cytosol	63.54	63.36
Os10t0430200-01	Rice	cytosol	63.81	63.11
Zm00001d020401_P001	Maize	cytosol	39.78	62.34
Zm00001d002346_P002	Maize	plastid	63.26	61.89
Os08t0270400-00	Rice	cytosol	51.66	61.51
TraesCS2D01G422400.1	Wheat	cytosol	62.43	61.41
TraesCS2B01G444200.2	Wheat	cytosol	62.15	60.98
TraesCS5B01G202700.1	Wheat	cytosol	59.94	60.96
VIT_00s0371g00070.t01	Wine grape	cytosol	61.33	60.82
TraesCS2A01G424600.1	Wheat	cytosol	61.88	60.7
TraesCS5D01G210600.1	Wheat	cytosol	59.67	60.67
TraesCS7D01G184600.1	Wheat	cytosol	33.7	60.4
TraesCS5A01G205700.1	Wheat	cytosol	59.39	60.39
OQU82308	Sorghum	cytosol	62.98	60.0
EER96708	Sorghum	cytosol	59.39	59.72
EER98869	Sorghum	cytosol	59.39	59.39
TraesCS7A01G183000.1	Wheat	cytosol	58.56	59.38
VIT_18s0001g14910.t01	Wine grape	cytosol	58.84	59.17
TraesCS7D01G184500.1	Wheat	cytosol	58.29	59.1
Os04t0612700-01	Rice	cytosol	61.6	58.84
TraesCS7D01G328300.1	Wheat	cytosol	66.3	58.54
Zm00001d020400_P001	Maize	plastid	58.84	58.36
Os09t0399800-01	Rice	cytosol	57.46	57.94
Os09t0400400-01	Rice	cytosol	57.46	57.46
Os09t0400300-01	Rice	plasma membrane	54.42	56.61
TraesCS5B01G209800.2	Wheat	plastid	60.5	56.3
TraesCS5A01G213900.1	Wheat	plastid	60.22	56.04
TraesCS5D01G218100.2	Wheat	plastid	59.67	55.67
VIT_03s0180g00260.t01	Wine grape	cytosol	54.42	55.18
TraesCS5B01G202800.1	Wheat	plastid	62.71	53.92
VIT_03s0180g00250.t01	Wine grape	cytosol	53.04	53.78
VIT_00s0174g00270.t01	Wine grape	cytosol	53.04	53.78
VIT_02s0025g03100.t01	Wine grape	cytosol	52.49	53.52
Os03t0223200-00	Rice	cytosol	56.08	53.14
TraesCS5D01G210700.1	Wheat	plastid	61.6	52.97
TraesCS5A01G205600.1	Wheat	plastid	61.6	52.84
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	51.38	52.84
VIT_00s0174g00220.t01	Wine grape	golgi	26.52	52.46
OQU89465	Sorghum	plastid	59.94	51.91
VIT_02s0025g03110.t01	Wine grape	cytosol	10.5	49.35
Os09t0400000-00	Rice	plasma membrane	58.56	48.62
VIT_00s0174g00210.t01	Wine grape	cytosol	17.68	48.12
VIT_18s0001g01160.t01	Wine grape	mitochondrion	20.44	45.96
VIT_00s0174g00280.t01	Wine grape	extracellular	42.27	42.62
Zm00001d020402_P001	Maize	plastid	12.71	37.7

Protein Annotations

EntrezGene:100855108	wikigene:100855108	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI33194	ProteinID:CBI33194.3	UniProt:D7TRR8	EMBL:FN596036
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100855108	wikigene:LOC100855108
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00015CD9A1	ArrayExpress:VIT_00s0346g00080
EnsemblPlantsGene:VIT_00s0346g00080	EnsemblPlants:VIT_00s0346g00080.t01	RefSeq:XP_003635250.1	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:+:24758320..24760689

Molecular Weight (calculated)

39073.4 Da

IEP (calculated)

6.744

GRAVY (calculated)

-0.010

Length

362 amino acids

Sequence
(BLAST)

001: MAKSPEEEHP VKAFGWAARD HSGHLSPFNF SRRETGEEDV RFKVLYCGIC HSDLHSIKNE WGNAAYPMVP GHEIVGVVTE VGSKVEKFKV GDKVGVGCLV
101: GACHSCESCS DDLENYCSKL ILTYNMPYHD GTRTYGGYSD TMVAPERYVV RIPDNMPLAA GAPLLCAGIT VYSPLKYFGF TQPGMHIGIV GLGGLGHVAV
201: KFAKAFGVKV TLISTSLSKK KEAIEHLGAD SFVVSHDPEQ MQAAMGTMDG ILDTVSATHP LLPLLGLLKN NGKLILLGVP EKPLELPAFS LIMGRKTVAG
301: SGIGGMKETQ EMLDFAAKHN VTADIEVVPM DYVNTAMERL AKADVRYRFV IDIGNSLSAT KP

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.