CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011798.1-P	Field mustard	cytosol	100.0	100.0
CDX69347	Canola	cytosol	97.24	97.24
AT4G37970.1	Thale cress	cytosol	88.67	88.43
VIT_00s0346g00080.t01	Wine grape	cytosol	66.02	66.02
VIT_00s0371g00100.t01	Wine grape	cytosol	65.75	65.75
PGSC0003DMT400040518	Potato	cytosol	62.15	63.2
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	65.47	63.03
Solyc11g011330.1.1	Tomato	cytosol	61.88	62.92
PGSC0003DMT400013704	Potato	cytosol	61.88	62.92
PGSC0003DMT400043757	Potato	cytosol	19.89	62.07
CDX90391	Canola	cytosol	60.5	62.04
CDY52519	Canola	cytosol	60.5	62.04
PGSC0003DMT400040520	Potato	cytosol	52.49	61.89
Solyc11g011340.1.1	Tomato	cytosol	61.33	61.84
PGSC0003DMT400080827	Potato	cytosol	35.91	61.32
CDX69348	Canola	cytosol	59.94	60.78
CDX75688	Canola	cytosol	59.67	60.5
PGSC0003DMT400024956	Potato	cytosol	19.89	60.0
CDX90392	Canola	cytosol	59.12	59.94
CDY52520	Canola	cytosol	43.37	59.7
PGSC0003DMT400041566	Potato	cytosol	59.12	59.61
CDY56752	Canola	cytosol	58.29	58.61
CDX72704	Canola	cytosol	58.01	58.33
Solyc11g010960.1.1	Tomato	cytosol	57.73	58.22
Solyc11g010980.1.1	Tomato	cytosol	57.46	57.94
CDX76968	Canola	cytosol	57.18	57.82
Solyc11g010990.1.1	Tomato	cytosol	57.18	57.66
CDY13791	Canola	cytosol	56.91	57.54
PGSC0003DMT400041573	Potato	cytosol	50.55	57.01
TraesCS6B01G406300.1	Wheat	cytosol	57.46	56.99
TraesCS6B01G406000.1	Wheat	cytosol	57.46	56.83
Os10t0430200-01	Rice	cytosol	57.46	56.83
Zm00001d024314_P001	Maize	cytosol	56.35	56.82
CDY63551	Canola	cytosol	10.5	56.72
TraesCS6D01G353700.1	Wheat	cytosol	57.18	56.56
TraesCS7D01G376600.1	Wheat	cytosol	57.46	56.52
TraesCS6D01G353400.1	Wheat	cytosol	57.46	56.52
TraesCS6A01G370100.1	Wheat	cytosol	55.52	56.46
PGSC0003DMT400041563	Potato	cytosol	38.67	56.45
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	25.14	56.17
TraesCS6A01G369800.1	Wheat	cytosol, golgi	56.63	56.16
TraesCS6B01G406200.1	Wheat	cytosol	56.63	56.01
TraesCS7A01G380100.1	Wheat	cytosol	56.91	55.98
PGSC0003DMT400024954	Potato	cytosol	41.44	55.97
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	52.21	55.92
TraesCS6D01G353300.1	Wheat	cytosol	56.35	55.89
TraesCS7B01G282100.1	Wheat	cytosol	56.91	55.68
Os08t0270400-00	Rice	cytosol	46.69	55.59
Os09t0399800-01	Rice	cytosol	54.7	55.15
EER96708	Sorghum	cytosol	54.7	55.0
TraesCS7A01G350500.1	Wheat	cytosol	56.35	54.99
TraesCS7B01G232400.1	Wheat	cytosol, plastid	57.18	54.91
Os09t0400400-01	Rice	cytosol	54.7	54.7
Zm00001d020401_P001	Maize	cytosol	34.81	54.55
TraesCS7D01G184600.1	Wheat	cytosol	30.39	54.46
TraesCS5A01G205700.1	Wheat	cytosol	53.31	54.21
TraesCS5D01G210600.1	Wheat	cytosol	53.31	54.21
EER98869	Sorghum	cytosol	53.87	53.87
Os04t0612700-01	Rice	cytosol	56.35	53.83
Zm00001d002346_P002	Maize	plastid	54.97	53.78
Os09t0400300-01	Rice	plasma membrane	51.66	53.74
TraesCS2A01G424600.1	Wheat	cytosol	54.7	53.66
TraesCS5B01G202700.1	Wheat	cytosol	52.76	53.65
TraesCS2D01G422400.1	Wheat	cytosol	54.42	53.53
TraesCS2B01G444200.2	Wheat	cytosol	54.42	53.39
TraesCS7A01G183000.1	Wheat	cytosol	52.49	53.22
TraesCS7D01G184500.1	Wheat	cytosol	52.49	53.22
Zm00001d020400_P001	Maize	plastid	53.04	52.6
OQU80077	Sorghum	cytosol	53.59	52.01
OQU82308	Sorghum	cytosol	53.59	51.05
TraesCS5B01G209800.2	Wheat	plastid	54.42	50.64
Os03t0223200-00	Rice	cytosol	53.31	50.52
TraesCS5A01G213900.1	Wheat	plastid	54.14	50.39
TraesCS5D01G218100.2	Wheat	plastid	53.87	50.26
TraesCS7D01G328300.1	Wheat	cytosol	56.91	50.24
VIT_00s0371g00070.t01	Wine grape	cytosol	50.0	49.59
TraesCS5B01G202800.1	Wheat	plastid	56.35	48.46
TraesCS5D01G210700.1	Wheat	plastid	56.08	48.22
PGSC0003DMT400041571	Potato	cytosol	18.51	48.2
TraesCS5A01G205600.1	Wheat	plastid	56.08	48.1
CDY46173	Canola	cytosol	47.51	47.12
CDY72501	Canola	cytosol	24.31	47.06
CDX72466	Canola	cytosol	46.41	47.06
CDX99222	Canola	cytosol	47.51	46.99
CDY49288	Canola	cytosol	46.13	46.78
CDX72936	Canola	cytosol	45.3	46.72
OQU89465	Sorghum	plastid	53.87	46.65
CDX69037	Canola	cytosol	45.86	46.5
CDX75413	Canola	cytosol	45.86	46.5
Os09t0400000-00	Rice	plasma membrane	54.7	45.41
Zm00001d020402_P001	Maize	plastid	10.77	31.97

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	GO:A0A078CFX8	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	EnsemblPlants:CDX75687	ProteinID:CDX75687	ProteinID:CDX75687.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00121623001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI000254640F	SEG:seg	:	:	:	:

Description

BnaA01g00150D

Coordinates

chrLK031804:+:2364592..2367770

Molecular Weight (calculated)

38919.7 Da

IEP (calculated)

6.566

GRAVY (calculated)

0.019

Length

362 amino acids

Sequence
(BLAST)

001: MERLGEKYQS VEAFGWAARD SSGHLSPFVF SRRETGEEEV RVKVLYCGVC HSDLHCLKNE WHSSIYPLVP GHEIVGEVAE IGRKVSKFSI GDKIGVGCIV
101: DSCRACESCR EDQENYCTKS VATYNGVHYD GTVNYGGYSD HIVVDECYAV KIPHTLPLAS AAPLLCAGIS MYSPMKYFGL AGQGKHIGIV GLGGLGHIGV
201: RFAKAFGSKV TVVSSTAGKS KDALENFGAD GFLVSTNEDQ MQAAMGTMDG IIDTVSASHP ILPLVGLLKP NGKLVLLGAT EKPFDLHAFS LILGRKSIAG
301: SAIGGIKETQ EMINFAAEHG IKAEIETISM EYVNTAMDRL AKGDVRYRFV IDIANTLAVT RS

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.