Factsheet for TraesCS6D01G353400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G353300.1	Wheat	cytosol	93.21	93.97
HORVU6Hr1G087220.1	Barley	cytosol	92.66	92.92
TraesCS6D01G353700.1	Wheat	cytosol	92.12	92.62
TraesCS7D01G376600.1	Wheat	cytosol	88.59	88.59
TraesCS7D01G328300.1	Wheat	cytosol	90.49	81.22
Zm00001d024314_P001	Maize	cytosol	77.45	79.39
Os10t0430200-01	Rice	cytosol	78.8	79.23
Os08t0270400-00	Rice	cytosol	64.95	78.62
OQU80077	Sorghum	cytosol	79.35	78.28
TraesCS2D01G422400.1	Wheat	cytosol	66.85	66.85
VIT_00s0371g00100.t01	Wine grape	cytosol	64.67	65.75
VIT_00s0346g00080.t01	Wine grape	cytosol	64.67	65.75
VIT_00s0371g00040.t01	Wine grape	cytosol	39.13	64.0
PGSC0003DMT400040520	Potato	cytosol	52.99	63.52
CDX90391	Canola	cytosol	60.87	63.46
VIT_00s0371g00050.t01	Wine grape	cytosol	61.96	63.33
Bra010627.1-P	Field mustard	cytosol	57.88	63.2
CDY52519	Canola	cytosol	60.6	63.17
VIT_00s0346g00110.t01	Wine grape	cytosol	61.68	63.06
KRH74457	Soybean	cytosol	61.14	62.67
Solyc11g011340.1.1	Tomato	cytosol	61.14	62.67
VIT_00s0615g00010.t01	Wine grape	cytosol	61.14	62.5
VIT_00s1389g00010.t01	Wine grape	cytosol	61.14	62.5
KRH74456	Soybean	cytosol	61.41	62.43
AT4G37990.1	Thale cress	cytosol	60.6	62.12
VIT_00s0346g00120.t01	Wine grape	cytosol	60.87	62.05
VIT_00s0346g00100.t01	Wine grape	cytosol	60.87	62.05
VIT_00s0615g00020.t01	Wine grape	cytosol	60.33	61.67
PGSC0003DMT400080827	Potato	cytosol	35.33	61.32
CDY52520	Canola	cytosol	43.75	61.22
PGSC0003DMT400043757	Potato	cytosol	19.29	61.21
VIT_00s0371g00060.t01	Wine grape	cytosol	49.46	60.67
KRG99878	Soybean	cytosol	59.24	60.39
KRH45510	Soybean	cytosol	48.37	60.14
PGSC0003DMT400041578	Potato	cytosol	58.97	60.11
AT4G37980.1	Thale cress	cytosol	58.15	59.94
Solyc11g011330.1.1	Tomato	cytosol	57.88	59.83
Bra010626.1-P	Field mustard	cytosol	56.25	59.83
TraesCS7D01G184500.1	Wheat	cytosol	57.61	59.38
PGSC0003DMT400040518	Potato	cytosol	57.34	59.27
CDX90392	Canola	cytosol	57.34	59.1
TraesCS5D01G210600.1	Wheat	cytosol	57.07	58.99
AT4G37970.1	Thale cress	cytosol	58.15	58.95
TraesCS7D01G184600.1	Wheat	cytosol	32.34	58.91
VIT_00s0371g00010.t01	Wine grape	cytosol	11.14	58.57
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	59.78	58.51
PGSC0003DMT400013704	Potato	cytosol	56.52	58.43
KRH07586	Soybean	cytosol	45.65	58.13
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	25.54	58.02
CDX69348	Canola	cytosol	55.98	57.7
Bra011799.1-P	Field mustard	cytosol	55.98	57.7
Bra010625.1-P	Field mustard	cytosol	40.22	57.59
VIT_00s0615g00030.t01	Wine grape	cytosol	62.23	57.54
Bra011798.1-P	Field mustard	cytosol	56.52	57.46
CDX69347	Canola	cytosol	56.52	57.46
CDX75687	Canola	cytosol	56.52	57.46
Solyc11g010980.1.1	Tomato	cytosol	55.98	57.38
Solyc11g010960.1.1	Tomato	cytosol	55.98	57.38
CDX75688	Canola	cytosol	55.43	57.14
PGSC0003DMT400041566	Potato	cytosol	55.43	56.82
Solyc11g010990.1.1	Tomato	cytosol	55.43	56.82
KRH39488	Soybean	cytosol	55.98	56.59
PGSC0003DMT400024956	Potato	cytosol	18.21	55.83
PGSC0003DMT400041563	Potato	cytosol	37.5	55.65
VIT_00s0218g00010.t01	Wine grape	cytosol	55.43	55.59
PGSC0003DMT400041573	Potato	cytosol	48.37	55.45
VIT_10s0003g04910.t01	Wine grape	cytosol	54.08	54.82
KRH45514	Soybean	cytosol	39.13	54.75
TraesCS5D01G218100.2	Wheat	plastid	57.07	54.12
TraesCS2D01G069800.1	Wheat	peroxisome	52.72	54.04
TraesCS2D01G064900.1	Wheat	peroxisome	52.45	53.91
KRH39487	Soybean	cytosol	44.57	52.9
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	48.37	52.66
PGSC0003DMT400024954	Potato	cytosol	37.23	51.12
TraesCS5D01G210700.1	Wheat	plastid	58.42	51.07
KRH45566	Soybean	cytosol	41.85	50.49
KRH49728	Soybean	cytosol	29.89	50.23
CDY63551	Canola	cytosol	8.97	49.25
PGSC0003DMT400041571	Potato	cytosol	18.48	48.92
TraesCS6D01G162800.1	Wheat	cytosol	47.55	48.61
TraesCS3D01G440900.1	Wheat	cytosol	47.28	47.8
VIT_00s0371g00020.t01	Wine grape	cytosol	7.07	47.27
VIT_00s0371g00070.t01	Wine grape	cytosol	46.74	47.12
Solyc05g024320.1.1	Tomato	cytosol	25.0	43.4
TraesCS3D01G441200.1	Wheat	extracellular, golgi	48.37	41.78
VIT_18s0001g01160.t01	Wine grape	mitochondrion	16.58	37.89
PGSC0003DMT400043759	Potato	cytosol	7.07	29.21

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS6D01G353400	EnsemblPlants:TraesCS6D01G353400.1	TIGR:cd05283	SEG:seg	:

Description

No Description!

Coordinates

chr6D:-:449216344..449221351

Molecular Weight (calculated)

39023.6 Da

IEP (calculated)

7.521

GRAVY (calculated)

0.072

Length

368 amino acids

Sequence
(BLAST)

001: MAPTAAEQHT RKAVGLAARD ASGHLSPLAI TRRGTGDDDV VIKILYCGIC HSDLHSIKNE WKNGRYPMVP GHEIAGEVAE VGKNVTKFKT GDRVGVGCMV
101: NSCQSCESCN KGFENHCPGI IPTYNLVDLD GTITYGGYSS MVVVHERFVV RFPDTIPLDK GAPLLCAGIT VYSPMKYHGL NVPGMHLGVL GLGGLGHVAV
201: KFGKAFGMKV TVISSSPGKK QEALERLGAD AFIVSKSADE MKAAMSSMDG IINTVSANIP MAPLLRLLKP NGKMILVGLP EKPMEISPFA LVAANKNLAG
301: SCIGGMRDTQ EMLDLAAKHD VTADIEVIGA EYVNTAMERL AKADVRYRFV IDIGNTLDKA AAAAVAAE

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.