Factsheet for HORVU6Hr1G087220.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G369800.1	Wheat	cytosol, golgi	95.1	95.62
TraesCS6B01G406000.1	Wheat	cytosol	94.55	94.81
TraesCS6D01G353300.1	Wheat	cytosol	93.73	94.25
TraesCS6B01G406300.1	Wheat	cytosol	93.46	93.97
TraesCS6D01G353400.1	Wheat	cytosol	92.92	92.66
TraesCS6A01G370100.1	Wheat	cytosol	89.37	92.13
TraesCS6D01G353700.1	Wheat	cytosol	91.28	91.53
TraesCS6B01G406200.1	Wheat	cytosol	91.01	91.26
HORVU7Hr1G079380.2	Barley	cytosol	91.55	90.32
Zm00001d024314_P001	Maize	cytosol	80.38	82.17
HORVU1Hr1G007800.1	Barley	cytosol	80.93	80.71
OQU80077	Sorghum	cytosol	81.74	80.43
Os10t0430200-01	Rice	cytosol	80.11	80.33
Os08t0270400-00	Rice	cytosol	65.67	79.28
HORVU6Hr1G032760.3	Barley	cytosol	47.14	57.86
HORVU2Hr1G099360.1	Barley	cytosol	11.17	56.16
HORVU5Hr1G062030.9	Barley	cytosol	56.95	54.29
HORVU2Hr1G010840.1	Barley	peroxisome	52.86	54.19
HORVU0Hr1G012860.2	Barley	plastid	59.13	51.54
HORVU3Hr1G097140.1	Barley	cytosol	49.05	50.56
HORVU3Hr1G097160.1	Barley	cytosol	47.68	49.44
HORVU6Hr1G035420.6	Barley	cytosol	46.32	46.7
HORVU2Hr1G010830.1	Barley	peroxisome	52.04	44.52
HORVU3Hr1G097060.1	Barley	cytosol, plastid	18.53	44.44
HORVU6Hr1G035410.1	Barley	cytosol	7.36	43.55
HORVU0Hr1G012940.6	Barley	cytosol	44.14	41.12
HORVU2Hr1G099350.2	Barley	cytosol, mitochondrion	22.62	20.65

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlantsGene:HORVU6Hr1G087220	EnsemblPlants:HORVU6Hr1G087220.1
UniProt:M0VUE3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059
PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002949582
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:563556676..563562163

Molecular Weight (calculated)

39032.4 Da

IEP (calculated)

6.430

GRAVY (calculated)

0.031

Length

367 amino acids

Sequence
(BLAST)

001: MAPTAAEQHT RKAVGLAARD ASGHLSPLAI TRRSTGDDDV VIKILYCGIC HSDLHCIKNE WKNARYPMIP GHEIAGEVTE VGKNVTKFKA GDRAGVGCMV
101: NSCQSCESCD KGFENHCPGI IATYNSVDLD GTITYGGYSS MVVVHERFVV RFPDTMPLDK GAPLLCAGIT VYSPMKYHGL NVPGMHLGVL GLGGLGHVAV
201: KFGKAFGMKV TVISSSPGKK QEALERLGAD AFVVSKDAEE MKAAMNTMDG IINTVSANIP MAPLLGLLKP NGKMIMVGLP ENPMEISPFA LVATNKTLAG
301: SCIGGMRDTQ EMLDLAAKHD VTADIEVIDA EYVNTAMERL AKADVRYRFV IDIGNTLDNA AAAATTE

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.