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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • plastid 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d024314_P001 Maize cytosol 86.06 89.42
TraesCS6A01G369800.1 Wheat cytosol, golgi 80.43 82.19
HORVU6Hr1G087220.1 Barley cytosol 80.43 81.74
TraesCS6D01G353300.1 Wheat cytosol 79.62 81.37
TraesCS6B01G406300.1 Wheat cytosol 79.09 80.82
TraesCS6B01G406000.1 Wheat cytosol 79.09 80.6
TraesCS7D01G376600.1 Wheat cytosol 79.36 80.43
HORVU7Hr1G079380.2 Barley cytosol 80.16 80.38
TraesCS7A01G350500.1 Wheat cytosol 79.89 80.32
TraesCS6D01G353700.1 Wheat cytosol 78.55 80.05
TraesCS7B01G282100.1 Wheat cytosol 79.36 80.0
TraesCS7A01G380100.1 Wheat cytosol 78.82 79.89
TraesCS6A01G370100.1 Wheat cytosol 76.14 79.78
TraesCS6D01G353400.1 Wheat cytosol 78.28 79.35
TraesCS6B01G406200.1 Wheat cytosol 76.94 78.42
TraesCS7B01G232400.1 Wheat cytosol, plastid 79.09 78.25
Os10t0430200-01 Rice cytosol 75.34 76.78
Os08t0270400-00 Rice cytosol 61.13 75.0
HORVU1Hr1G007800.1 Barley cytosol 72.65 73.64
TraesCS7D01G328300.1 Wheat cytosol 80.43 73.17
OQU82308 Sorghum cytosol 67.56 66.32
VIT_00s0346g00080.t01 Wine grape cytosol 64.08 66.02
VIT_00s0371g00100.t01 Wine grape cytosol 63.81 65.75
CDY52519 Canola cytosol 61.13 64.59
Bra010627.1-P Field mustard cytosol 58.18 64.39
CDX90391 Canola cytosol 60.86 64.31
VIT_00s0371g00040.t01 Wine grape cytosol 38.61 64.0
VIT_00s0371g00050.t01 Wine grape cytosol 61.13 63.33
VIT_00s0346g00110.t01 Wine grape cytosol 61.13 63.33
KRH74457 Soybean cytosol 60.59 62.95
VIT_00s0615g00010.t01 Wine grape cytosol 60.59 62.78
VIT_00s0615g00020.t01 Wine grape cytosol 60.59 62.78
AT4G37990.1 Thale cress cytosol 60.32 62.67
VIT_00s1389g00010.t01 Wine grape cytosol 60.32 62.5
CDY52520 Canola cytosol 43.7 61.98
VIT_00s0346g00120.t01 Wine grape cytosol 59.79 61.77
AT4G37980.1 Thale cress cytosol 58.71 61.34
KRH74456 Soybean cytosol 59.52 61.33
PGSC0003DMT400080827 Potato cytosol 34.85 61.32
VIT_00s0346g00100.t01 Wine grape cytosol 59.25 61.22
PGSC0003DMT400043757 Potato cytosol 19.03 61.21
PGSC0003DMT400040520 Potato cytosol 50.13 60.91
Bra010626.1-P Field mustard cytosol 56.3 60.69
Solyc11g011340.1.1 Tomato cytosol 58.18 60.45
PGSC0003DMT400041578 Potato cytosol 58.45 60.39
CDX90392 Canola cytosol 57.64 60.22
EER98870 Sorghum cytosol 15.82 60.2
Solyc11g011330.1.1 Tomato cytosol 57.1 59.83
CDX69348 Canola cytosol 56.57 59.1
Bra011799.1-P Field mustard cytosol 56.57 59.1
VIT_00s0371g00060.t01 Wine grape cytosol 47.45 59.0
KRH07586 Soybean cytosol 45.58 58.82
PGSC0003DMT400040518 Potato cytosol 56.03 58.71
EER98869 Sorghum cytosol 56.84 58.56
CDX75688 Canola cytosol 56.03 58.54
VIT_18s0122g00450.t01 Wine grape cytosol, plastid 58.98 58.51
PGSC0003DMT400041566 Potato cytosol 56.3 58.5
KRG99878 Soybean cytosol 56.57 58.45
Bra010625.1-P Field mustard cytosol 40.21 58.37
Solyc11g010960.1.1 Tomato cytosol 56.03 58.22
Solyc11g010990.1.1 Tomato cytosol 56.03 58.22
VIT_00s0615g00030.t01 Wine grape cytosol 61.93 58.04
Solyc11g010980.1.1 Tomato cytosol 55.76 57.94
EER96708 Sorghum cytosol 55.76 57.78
KRH45510 Soybean cytosol 45.84 57.77
PGSC0003DMT400013704 Potato cytosol 54.69 57.3
PGSC0003DMT400041573 Potato cytosol 49.06 57.01
EES10404 Sorghum cytosol 55.23 56.91
VIT_00s0218g00010.t01 Wine grape cytosol 55.76 56.68
AT4G37970.1 Thale cress cytosol 54.69 56.2
Solyc04g048960.1.1 Tomato endoplasmic reticulum, extracellular 24.4 56.17
PGSC0003DMT400041563 Potato cytosol 36.73 55.24
CDX69347 Canola cytosol 52.81 54.42
VIT_00s0371g00010.t01 Wine grape cytosol 10.19 54.29
PGSC0003DMT400024956 Potato cytosol 17.43 54.17
KRH39488 Soybean cytosol 52.81 54.12
VIT_10s0003g04910.t01 Wine grape cytosol 52.28 53.72
CDX75687 Canola cytosol 52.01 53.59
Bra011798.1-P Field mustard cytosol 52.01 53.59
VIT_00s0371g00020.t01 Wine grape cytosol 7.77 52.73
VIT_00s0346g00090.t01 Wine grape cytosol, peroxisome, plastid 47.45 52.37
KRH39487 Soybean cytosol 43.43 52.26
KRH49728 Soybean cytosol 30.56 52.05
KRH45514 Soybean cytosol 36.46 51.71
OQU89465 Sorghum plastid 57.64 51.44
KRH45566 Soybean cytosol 41.55 50.82
PGSC0003DMT400041571 Potato cytosol 18.77 50.36
PGSC0003DMT400024954 Potato cytosol 35.66 49.63
CDY63551 Canola cytosol 8.85 49.25
OQU75993 Sorghum cytosol 46.65 49.15
EER88002 Sorghum cytosol 46.65 49.15
EER88001 Sorghum cytosol 46.65 49.15
VIT_00s0371g00070.t01 Wine grape cytosol 46.92 47.95
OQU79199 Sorghum cytosol 40.21 46.58
KXG29649 Sorghum cytosol 45.58 46.58
Solyc05g024320.1.1 Tomato cytosol 23.59 41.51
KXG19525 Sorghum cytosol 46.11 41.15
VIT_18s0001g01160.t01 Wine grape mitochondrion 17.16 39.75
OQU75994 Sorghum cytosol 17.16 35.75
PGSC0003DMT400043759 Potato cytosol 7.24 30.34
Protein Annotations
Gene3D:3.40.50.720Gene3D:3.90.180.10MapMan:50.1.1EntrezGene:8071179UniProt:A0A1Z5R8N9InterPro:ADH_C
InterPro:ADH_NInterPro:ADH_Zn_CSGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sfEnsemblPlants:OQU80077ProteinID:OQU80077ProteinID:OQU80077.1PFAM:PF00107PFAM:PF08240
InterPro:PKS_ERScanProsite:PS00059PANTHER:PTHR42683PANTHER:PTHR42683:SF26SMART:SM00829EnsemblPlantsGene:SORBI_3007G076000
SUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI0001A87E40RefSeq:XP_002445214.1SEG:seg:
Description
hypothetical protein
Coordinates
chr7:-:8729710..8733771
Molecular Weight (calculated)
39203.5 Da
IEP (calculated)
6.888
GRAVY (calculated)
0.043
Length
373 amino acids
Sequence
(BLAST)
001: MAPTVAAEAA AAKGQLQHTG KAVGLAAHDA SGHLAPLTIT RRSTGDDDVA IKILFCGMCH SDLHSIKNEW GNAMYPMVPG HEIAGVVTEV GKNVTRFNPG
101: DRVGVGCMVN SCQSCDGCAE GFENTCGGGI IFTYNSVDRD GTVTYGGYSS SVTVHERFVV RFPDGMPLDR GAPLLCAGIT VYSPMKYHGL NKPGKHVGVL
201: GLGGLGHVAV KLAKAAFGMK VTVISTSPGK KQEAMDRLGA DAFVVSKDAE EMKAAASTMD GIINTVSANI PLAPFMSLLK PNGKMIMVGL PTKALEIPPF
301: DLIMGNKTLA GSCIGGMRDT QEMLDVAAKH GVTADIELVD ADYVNTAMER LAKADVRYRF VIDIGNTLKN ADQ
Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)
001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP
Arabidopsis Description
CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.