CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004443_P001	Maize	extracellular	87.29	87.53
HORVU2Hr1G010840.1	Barley	peroxisome	86.46	87.43
TraesCS2D01G064900.1	Wheat	peroxisome	86.19	87.15
Os04t0229100-01	Rice	cytosol	85.08	85.56
TraesCS2A01G066400.1	Wheat	peroxisome	85.08	85.56
TraesCS2A01G066500.1	Wheat	peroxisome	85.08	85.56
TraesCS2B01G078600.1	Wheat	cytosol	74.86	83.64
TraesCS2B01G078700.1	Wheat	cytosol	84.81	78.12
GSMUA_Achr5P11490_001	Banana	cytosol	73.48	74.3
HORVU2Hr1G010830.1	Barley	peroxisome	85.64	72.26
VIT_18s0001g14910.t01	Wine grape	cytosol	71.82	72.22
PGSC0003DMT400054502	Potato	peroxisome	66.85	67.22
PGSC0003DMT400033637	Potato	peroxisome	66.02	66.39
Solyc02g030480.2.1	Tomato	peroxisome	65.75	66.11
Solyc02g069250.2.1	Tomato	peroxisome	65.47	65.83
KRH17471	Soybean	cytosol	65.47	65.65
KRH05985	Soybean	cytosol	64.36	64.36
PGSC0003DMT400059621	Potato	cytosol	58.56	58.56
EER98870	Sorghum	cytosol	15.19	56.12
Solyc08g014360.1.1	Tomato	plastid	58.29	55.53
OQU80077	Sorghum	cytosol	56.91	55.23
EER98869	Sorghum	cytosol	54.97	54.97
EER96708	Sorghum	cytosol	54.14	54.44
EER88002	Sorghum	cytosol	49.45	50.56
OQU75993	Sorghum	cytosol	49.45	50.56
EER88001	Sorghum	cytosol	49.17	50.28
OQU79199	Sorghum	cytosol	44.2	49.69
OQU82308	Sorghum	cytosol	50.55	48.16
OQU89465	Sorghum	plastid	52.76	45.69
KXG29649	Sorghum	cytosol	45.58	45.21
KXG19525	Sorghum	cytosol	48.9	42.34
OQU75994	Sorghum	cytosol	17.96	36.31

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	EntrezGene:8080294	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:C5YC51	EnsemblPlants:EES10404	ProteinID:EES10404	ProteinID:EES10404.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4	SMART:SM00829	EnsemblPlantsGene:SORBI_3006G014700
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001A86C96	RefSeq:XP_002446076.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:2192523..2194215

Molecular Weight (calculated)

38869.9 Da

IEP (calculated)

6.575

GRAVY (calculated)

0.008

Length

362 amino acids

Sequence
(BLAST)

001: MEVTPNHTQT VAGWAAMNES GKLEPFIFKR RENGVDDVTI KVEYCGMCHT DLHFIQNDWG ITMYPLVPGH EITGVVTKVG SNVTGFGVGD RVGVGCIAAS
101: CLDCDHCRRS EENYCDKVTL TYNGVFPDGS VTYGGYSKML VAHKRFVVRV PDTLPLDAAA PLLCAGITVY SPMKHHGMLR SAGASLGVVG LGGLGHVAVK
201: FAKAFGLRVT VVSTSPAKEK EARERLGADD FVVSSDQKQM QAMARSLDYV IDTVSAKHSL GPILELLKVN GKLVLVAAPD QPVELPSFPL IFGKRTVSGS
301: MTGGMKETQE MLDLCGQHGI TCDIELVSTD GINDALQRLA SNDVRYRFVI DIAGGDSSNS KL

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.