Factsheet for Solyc08g014360.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059621	Potato	cytosol	92.11	96.69
GSMUA_Achr5P11490_001	Banana	cytosol	62.37	66.2
Solyc02g030480.2.1	Tomato	peroxisome	61.58	65.0
Solyc02g069250.2.1	Tomato	peroxisome	59.47	62.78
Os04t0229100-01	Rice	cytosol	57.37	60.56
TraesCS2A01G070900.1	Wheat	peroxisome	57.11	60.45
TraesCS2B01G084600.1	Wheat	peroxisome	57.11	60.28
TraesCS2B01G084500.1	Wheat	cytosol	45.79	60.21
HORVU2Hr1G010840.1	Barley	peroxisome	56.58	60.06
TraesCS2D01G069800.1	Wheat	peroxisome	56.58	59.89
TraesCS2D01G064900.1	Wheat	peroxisome	55.53	58.94
TraesCS2A01G066500.1	Wheat	peroxisome	55.79	58.89
TraesCS2A01G066400.1	Wheat	peroxisome	55.79	58.89
EES10404	Sorghum	cytosol	55.53	58.29
TraesCS2B01G078600.1	Wheat	cytosol	48.16	56.48
Zm00001d004443_P001	Maize	extracellular	53.42	56.23
TraesCS2B01G078700.1	Wheat	cytosol	55.79	53.94
Solyc11g010960.1.1	Tomato	cytosol	50.0	52.92
Solyc11g011330.1.1	Tomato	cytosol	48.16	51.4
Solyc11g011340.1.1	Tomato	cytosol	47.37	50.14
HORVU2Hr1G010830.1	Barley	peroxisome	56.05	49.65
Solyc11g010990.1.1	Tomato	cytosol	46.32	49.03
Solyc03g078440.2.1	Tomato	cytosol	49.74	48.34
Solyc11g010980.1.1	Tomato	cytosol	45.26	47.91
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	25.26	46.15
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	19.47	45.68
Solyc01g107590.2.1	Tomato	cytosol, extracellular	42.11	44.82
Solyc08g048300.1.1	Tomato	cytosol	9.47	39.13
Solyc05g024320.1.1	Tomato	cytosol	20.53	36.79
Solyc12g055820.1.1	Tomato	cytosol	43.95	31.69

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
UniProt:K4CJ69	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR42683
PANTHER:PTHR42683:SF4	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc08g014360.1	EnsemblPlants:Solyc08g014360.1.1
UniParc:UPI000276B297	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:4217825..4223907

Molecular Weight (calculated)

41818.8 Da

IEP (calculated)

8.531

GRAVY (calculated)

-0.074

Length

380 amino acids

Sequence
(BLAST)

001: MPLSPSILKS LTSPTISPMA KSTPKLTQSA LGWAAQDSSG KLTPFMFKRR ENGLDDVTIK ILYCGMCRTD VHFAKNDWGN TTYPIVPGYE IIGIVIKVGS
101: NVSKFKVGER VGVGYVAATC LDCELCNSFQ ENYCDQMKPV YNSIHWDDTP TYGGYSTIMV ADHRYVVHIP DSLPMDRAAP LMGAGLTVYT AMKNSNLFES
201: PGKHMAVIGL GGVGHMAIKF GKAFGHHVTV ISTSPSKEKD AKEKLDADGF ILSTDLKQMQ RNRRSLDFII DTVSAKHSLG PYLELLKVNG TISIVGEPAQ
301: PIEVLATPLI YGKKVVRGSI IGSVKELQEM MNFCGKHNIL CEIELVTIDK INEAFDRLSK NDVKFRFVLN VAAHQYSSRL

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.