Factsheet for Solyc03g078430.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047475	Potato	cytosol	79.81	46.11
Solyc03g078440.2.1	Tomato	cytosol	79.81	42.46
Bra033613.1-P	Field mustard	cytosol	70.19	40.56
CDX72704	Canola	cytosol	70.19	40.56
CDY56752	Canola	cytosol	70.19	40.56
AT4G39330.1	Thale cress	cytosol	69.71	40.28
VIT_04s0044g00190.t01	Wine grape	cytosol	69.23	40.11
Bra031216.1-P	Field mustard	cytosol	68.75	39.94
KRH43378	Soybean	cytosol	68.27	39.89
CDX76968	Canola	cytosol	68.27	39.66
KRH59514	Soybean	cytosol	68.27	39.44
CDY13791	Canola	cytosol	67.79	39.39
VIT_04s0044g00210.t01	Wine grape	cytosol	65.38	37.88
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	28.85	37.04
AT2G21730.1	Thale cress	peroxisome	64.9	35.9
AT2G21890.1	Thale cress	cytosol	63.46	35.2
Solyc11g011340.1.1	Tomato	cytosol	60.1	34.82
Solyc11g010980.1.1	Tomato	cytosol	59.62	34.54
Solyc11g010990.1.1	Tomato	cytosol	59.62	34.54
Solyc11g010960.1.1	Tomato	cytosol	58.17	33.7
Solyc11g011330.1.1	Tomato	cytosol	56.73	33.15
Solyc02g069250.2.1	Tomato	peroxisome	47.6	27.5
Solyc02g030480.2.1	Tomato	peroxisome	47.6	27.5
Solyc01g107590.2.1	Tomato	cytosol, extracellular	46.63	27.17
EER98870	Sorghum	cytosol	12.02	25.51
Solyc08g014360.1.1	Tomato	plastid	46.15	25.26
Solyc08g048300.1.1	Tomato	cytosol	11.06	25.0
Solyc05g024320.1.1	Tomato	cytosol	24.04	23.58
Solyc12g055820.1.1	Tomato	cytosol	49.04	19.35

Protein Annotations

EnsemblPlants:Solyc03g078430.1.1	EnsemblPlantsGene:Solyc03g078430.1	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR42683	PANTHER:PTHR42683:SF12
PFAM:PF08240	SEG:seg	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002767FAE	UniProt:K4BHS2
MapMan:50.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:50917579..50920321

Molecular Weight (calculated)

22143.3 Da

IEP (calculated)

6.865

GRAVY (calculated)

0.139

Length

208 amino acids

Sequence
(BLAST)

001: MSSRKKLLLG LQGPLLNPLS LPFLPQMATL GPVTRHEIVG VVTAVGNSVH KFQVGDRVGV GVIVGSCQTC DICEQNHDGT NTYGGYSDII VVHPRFVVQF
101: PENLPFDAGA PLLCAGITVY SPMKYYGMTE QGKHLGVAGL GGLGHIAVKI ESLLKMDGKL ITVGLPEKPL ELPSRKLVGG SDIGGMKETQ EMLDICAKHN
201: NTADIELI

Best Arabidopsis Sequence Match ( AT4G37980.1 )
(BLAST)

001: MGKVLEKEAF GLAAKDESGI LSPFSFSRRA TGEKDVRFKV LFCGICHTDL SMAKNEWGLT TYPLVPGHEI VGVVTEVGAK VKKFNAGDKV GVGYMAGSCR
101: SCDSCNDGDE NYCPKMILTS GAKNFDDTMT HGGYSDHMVC AEDFIIRIPD NLPLDGAAPL LCAGVTVYSP MKYHGLDKPG MHIGVVGLGG LGHVAVKFAK
201: AMGTKVTVIS TSERKRDEAV TRLGADAFLV SRDPKQMKDA MGTMDGIIDT VSATHPLLPL LGLLKNKGKL VMVGAPAEPL ELPVFPLIFG RKMVVGSMVG
301: GIKETQEMVD LAGKHNITAD IELISADYVN TAMERLAKAD VKYRFVIDVA NTMKPTP

Arabidopsis Description

CAD7ELI3-1 [Source:UniProtKB/TrEMBL;Acc:A0A178V3X8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.