Factsheet for Solyc02g030480.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 3
plastid 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033637	Potato	peroxisome	95.83	95.83
VIT_18s0001g14910.t01	Wine grape	cytosol	78.33	78.33
GSMUA_Achr5P11490_001	Banana	cytosol	75.0	75.42
Solyc02g069250.2.1	Tomato	peroxisome	75.28	75.28
Os04t0229100-01	Rice	cytosol	68.61	68.61
HORVU2Hr1G010840.1	Barley	peroxisome	66.39	66.76
TraesCS2D01G064900.1	Wheat	peroxisome	65.83	66.2
TraesCS2A01G070900.1	Wheat	peroxisome	65.83	66.02
EES10404	Sorghum	cytosol	66.11	65.75
TraesCS2D01G069800.1	Wheat	peroxisome	65.56	65.74
TraesCS2B01G084600.1	Wheat	peroxisome	65.56	65.56
TraesCS2A01G066500.1	Wheat	peroxisome	65.28	65.28
TraesCS2A01G066400.1	Wheat	peroxisome	65.28	65.28
TraesCS2B01G084500.1	Wheat	cytosol	51.94	64.71
Zm00001d004443_P001	Maize	extracellular	64.17	63.99
TraesCS2B01G078600.1	Wheat	cytosol	57.5	63.89
Solyc08g014360.1.1	Tomato	plastid	65.0	61.58
TraesCS2B01G078700.1	Wheat	cytosol	65.83	60.31
HORVU2Hr1G010830.1	Barley	peroxisome	65.83	55.24
Solyc11g010960.1.1	Tomato	cytosol	53.33	53.48
Solyc11g011330.1.1	Tomato	cytosol	52.22	52.81
Solyc11g011340.1.1	Tomato	cytosol	52.5	52.65
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	23.33	51.85
Solyc11g010990.1.1	Tomato	cytosol	50.0	50.14
Solyc11g010980.1.1	Tomato	cytosol	49.72	49.86
Solyc03g078440.2.1	Tomato	cytosol	53.61	49.36
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	27.5	47.6
Solyc01g107590.2.1	Tomato	cytosol, extracellular	45.28	45.66
Solyc08g048300.1.1	Tomato	cytosol	10.83	42.39
Solyc05g024320.1.1	Tomato	cytosol	23.06	39.15
Solyc12g055820.1.1	Tomato	cytosol	47.22	32.26

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:K4B597	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc02g030480.2	EnsemblPlants:Solyc02g030480.2.1	UniParc:UPI0002768DC5
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:26208508..26212516

Molecular Weight (calculated)

39562.7 Da

IEP (calculated)

7.009

GRAVY (calculated)

-0.137

Length

360 amino acids

Sequence
(BLAST)

001: MAQTTPNHTQ TVSGWAAHDS SGKITPFIFK RRENGENDVT IEILYCGMCH TDIHHVKDDW GITKYPVVPG HEITGFITKV GRNVSKFKIG DRVGVGCLAA
101: TCLKCEYCKG SQENYCDQVE FTYNGIFWDG SITYGGYSKM LVADHRYVVC IPDNMAMDRA APLLCAGITV FTPFKDNNLV DTKGKKIGII GLGGLGHVAV
201: KFGKAFGHHV TVISTSPSKE QEAKHNLGAD DFIISTNPKQ MMEKKRTLDF ILDTVSAKHS LGSYLELLKV NGTLVIVGAP DKPIDLPAFP MIFGKRTVKG
301: SMIGSIEETQ EMMDLCGKHN ILSDIEIITT DQINEGLERL ANNDVKYRFV IDIAGPSSHL

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.