Factsheet for Solyc04g048960.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 2
plastid 3
endoplasmic reticulum 3
extracellular 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0371g00020.t01	Wine grape	cytosol	19.75	58.18
PGSC0003DMT400013704	Potato	cytosol	81.48	37.08
Solyc11g011330.1.1	Tomato	cytosol	78.4	35.67
Solyc05g024320.1.1	Tomato	cytosol	44.44	33.96
Solyc11g011340.1.1	Tomato	cytosol	73.46	33.15
Solyc08g048300.1.1	Tomato	cytosol	18.52	32.61
Solyc11g010980.1.1	Tomato	cytosol	69.14	31.2
Solyc11g010990.1.1	Tomato	cytosol	67.28	30.36
Solyc11g010960.1.1	Tomato	cytosol	66.67	30.08
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	37.04	28.85
TraesCS6A01G370100.1	Wheat	cytosol	56.79	25.84
TraesCS7D01G376600.1	Wheat	cytosol	58.64	25.82
TraesCS6A01G369800.1	Wheat	cytosol, golgi	58.02	25.75
TraesCS6B01G406200.1	Wheat	cytosol	58.02	25.68
TraesCS6D01G353700.1	Wheat	cytosol	58.02	25.68
TraesCS7B01G282100.1	Wheat	cytosol	58.64	25.68
TraesCS6D01G353400.1	Wheat	cytosol	58.02	25.54
TraesCS7A01G380100.1	Wheat	cytosol	58.02	25.54
TraesCS6B01G406300.1	Wheat	cytosol	57.41	25.48
CDX69347	Canola	cytosol	56.79	25.41
TraesCS6B01G406000.1	Wheat	cytosol	57.41	25.41
Zm00001d024314_P001	Maize	cytosol	56.17	25.35
TraesCS6D01G353300.1	Wheat	cytosol	56.79	25.21
Bra011798.1-P	Field mustard	cytosol	56.17	25.14
CDX75687	Canola	cytosol	56.17	25.14
TraesCS7A01G350500.1	Wheat	cytosol	57.41	25.07
TraesCS7B01G232400.1	Wheat	cytosol, plastid	58.02	24.93
AT4G37970.1	Thale cress	cytosol	55.56	24.79
TraesCS5D01G210600.1	Wheat	cytosol	53.7	24.44
OQU80077	Sorghum	cytosol	56.17	24.4
TraesCS5B01G202700.1	Wheat	cytosol	53.09	24.16
TraesCS5A01G205700.1	Wheat	cytosol	53.09	24.16
Os10t0430200-01	Rice	cytosol	54.32	24.04
Solyc03g078440.2.1	Tomato	cytosol	58.02	24.04
Solyc02g030480.2.1	Tomato	peroxisome	51.85	23.33
EER96708	Sorghum	cytosol	51.85	23.33
TraesCS7D01G184500.1	Wheat	cytosol	51.23	23.25
TraesCS7A01G183000.1	Wheat	cytosol	51.23	23.25
TraesCS7D01G328300.1	Wheat	cytosol	58.64	23.17
Solyc02g069250.2.1	Tomato	peroxisome	51.23	23.06
EER98869	Sorghum	cytosol	51.23	22.93
TraesCS5A01G213900.1	Wheat	plastid	54.94	22.88
Os09t0399800-01	Rice	cytosol	50.62	22.84
TraesCS5D01G218100.2	Wheat	plastid	54.32	22.68
TraesCS5B01G209800.2	Wheat	plastid	54.32	22.62
Os09t0400400-01	Rice	cytosol	50.0	22.38
Os03t0223200-00	Rice	cytosol	52.47	22.25
Zm00001d020400_P001	Maize	plastid	50.0	22.19
Os09t0400300-01	Rice	plasma membrane	47.53	22.13
Zm00001d002346_P002	Maize	plastid	50.0	21.89
Solyc01g107590.2.1	Tomato	cytosol, extracellular	47.53	21.57
Os04t0612700-01	Rice	cytosol	50.0	21.37
OQU82308	Sorghum	cytosol	50.0	21.32
TraesCS5B01G202800.1	Wheat	plastid	54.32	20.9
TraesCS2A01G424600.1	Wheat	cytosol	47.53	20.87
TraesCS5D01G210700.1	Wheat	plastid	53.7	20.67
TraesCS2D01G422400.1	Wheat	cytosol	46.91	20.65
TraesCS5A01G205600.1	Wheat	plastid	53.7	20.62
TraesCS2B01G444200.2	Wheat	cytosol	46.91	20.6
OQU89465	Sorghum	plastid	53.09	20.57
Os08t0270400-00	Rice	cytosol	38.27	20.39
Zm00001d020401_P001	Maize	cytosol	27.78	19.48
Solyc08g014360.1.1	Tomato	plastid	45.68	19.47
Os09t0400000-00	Rice	plasma membrane	50.0	18.58
TraesCS7D01G184600.1	Wheat	cytosol	20.37	16.34
Solyc12g055820.1.1	Tomato	cytosol	47.53	14.61
VIT_00s0371g00010.t01	Wine grape	cytosol	1.23	2.86
Zm00001d020402_P001	Maize	plastid	1.23	1.64

Protein Annotations

EnsemblPlants:Solyc04g048960.1.1	EnsemblPlantsGene:Solyc04g048960.1	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR42683
PANTHER:PTHR42683:SF26	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002766444	UniProt:K4BRM4	MapMan:50.1.1

Description

No Description!

Coordinates

chr4:-:38740505..38741231

Molecular Weight (calculated)

17380.7 Da

IEP (calculated)

7.056

GRAVY (calculated)

0.364

Length

162 amino acids

Sequence
(BLAST)

001: MEVASLLCVG ITIYSPLKYF GLDKPGMHIG VVGLGGLVHM ALKFSKAFGT RVTVISTSLS KKDAAIERLG GAEGSLDGII GTVCMIHPLL PLINLLKTHG
101: KLAMTGAPEK PLDLPVFPQL LASARSFIGE MKETQEMMAK HNITPDIEVI PMDYVNTTLD TF

Best Arabidopsis Sequence Match ( AT4G37980.1 )
(BLAST)

001: MGKVLEKEAF GLAAKDESGI LSPFSFSRRA TGEKDVRFKV LFCGICHTDL SMAKNEWGLT TYPLVPGHEI VGVVTEVGAK VKKFNAGDKV GVGYMAGSCR
101: SCDSCNDGDE NYCPKMILTS GAKNFDDTMT HGGYSDHMVC AEDFIIRIPD NLPLDGAAPL LCAGVTVYSP MKYHGLDKPG MHIGVVGLGG LGHVAVKFAK
201: AMGTKVTVIS TSERKRDEAV TRLGADAFLV SRDPKQMKDA MGTMDGIIDT VSATHPLLPL LGLLKNKGKL VMVGAPAEPL ELPVFPLIFG RKMVVGSMVG
301: GIKETQEMVD LAGKHNITAD IELISADYVN TAMERLAKAD VKYRFVIDVA NTMKPTP

Arabidopsis Description

CAD7ELI3-1 [Source:UniProtKB/TrEMBL;Acc:A0A178V3X8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.