Factsheet for Zm00001d002346_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 20089766
plastid: 22065420

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82308	Sorghum	cytosol	93.78	91.32
Os04t0612700-01	Rice	cytosol	74.05	72.3
TraesCS2D01G422400.1	Wheat	cytosol	71.89	72.28
TraesCS2A01G424600.1	Wheat	cytosol	71.89	72.09
TraesCS2B01G444200.2	Wheat	cytosol	71.35	71.54
Zm00001d024314_P001	Maize	cytosol	69.19	71.31
VIT_00s0346g00080.t01	Wine grape	cytosol	61.89	63.26
VIT_00s0371g00100.t01	Wine grape	cytosol	61.62	62.98
CDY52519	Canola	cytosol	57.57	60.34
CDX90391	Canola	cytosol	57.3	60.06
Bra010627.1-P	Field mustard	cytosol	54.59	59.94
VIT_00s0346g00110.t01	Wine grape	cytosol	57.84	59.44
VIT_00s0371g00050.t01	Wine grape	cytosol	57.84	59.44
VIT_00s0615g00010.t01	Wine grape	cytosol	57.57	59.17
VIT_00s1389g00010.t01	Wine grape	cytosol	57.3	58.89
VIT_00s0346g00100.t01	Wine grape	cytosol	57.3	58.73
VIT_00s0371g00040.t01	Wine grape	cytosol	35.68	58.67
VIT_00s0615g00020.t01	Wine grape	cytosol	57.03	58.61
CDY52520	Canola	cytosol	41.62	58.56
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	59.46	58.51
VIT_00s0346g00120.t01	Wine grape	cytosol	57.03	58.45
VIT_00s0371g00060.t01	Wine grape	cytosol	47.3	58.33
AT4G37990.1	Thale cress	cytosol	56.49	58.22
KRH74457	Soybean	cytosol	56.22	57.94
AT4G37980.1	Thale cress	cytosol	55.68	57.7
Bra010626.1-P	Field mustard	cytosol	53.78	57.51
KRH74456	Soybean	cytosol	56.22	57.46
CDX90392	Canola	cytosol	55.41	57.42
Bra010625.1-P	Field mustard	cytosol	39.73	57.2
AT4G37970.1	Thale cress	cytosol	55.68	56.75
PGSC0003DMT400040520	Potato	cytosol	47.03	56.68
Solyc11g011340.1.1	Tomato	cytosol	54.59	56.27
PGSC0003DMT400041578	Potato	cytosol	54.86	56.23
KRH45510	Soybean	cytosol	44.86	56.08
Solyc11g011330.1.1	Tomato	cytosol	53.78	55.9
CDX69347	Canola	cytosol	54.59	55.8
CDX69348	Canola	cytosol	53.78	55.74
PGSC0003DMT400080827	Potato	cytosol	31.89	55.66
PGSC0003DMT400041563	Potato	cytosol	37.3	55.65
Bra011799.1-P	Field mustard	cytosol	53.51	55.46
CDX75688	Canola	cytosol	53.24	55.18
KRG99878	Soybean	cytosol	53.78	55.12
Zm00001d020400_P001	Maize	plastid	54.32	55.07
Bra011798.1-P	Field mustard	cytosol	53.78	54.97
CDX75687	Canola	cytosol	53.78	54.97
VIT_00s0615g00030.t01	Wine grape	cytosol	58.92	54.77
VIT_00s0371g00010.t01	Wine grape	cytosol	10.27	54.29
Solyc11g010990.1.1	Tomato	cytosol	52.43	54.04
PGSC0003DMT400041566	Potato	cytosol	52.43	54.04
PGSC0003DMT400040518	Potato	cytosol	51.89	53.93
PGSC0003DMT400013704	Potato	cytosol	51.89	53.93
KRH39488	Soybean	cytosol	52.97	53.85
Solyc11g010960.1.1	Tomato	cytosol	52.16	53.76
Solyc11g010980.1.1	Tomato	cytosol	52.16	53.76
KRH07586	Soybean	cytosol	41.89	53.63
VIT_00s0218g00010.t01	Wine grape	cytosol	52.97	53.41
VIT_10s0003g04910.t01	Wine grape	cytosol	52.16	53.17
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	47.57	52.07
Zm00001d020401_P001	Maize	cytosol	32.43	51.95
PGSC0003DMT400041573	Potato	cytosol	44.86	51.71
Zm00001d004443_P001	Maize	extracellular	50.27	51.52
KRH39487	Soybean	cytosol	42.97	51.29
KRH45514	Soybean	cytosol	35.68	50.19
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	21.89	50.0
PGSC0003DMT400043757	Potato	cytosol	15.41	49.14
PGSC0003DMT400024954	Potato	cytosol	35.41	48.88
Zm00001d045043_P001	Maize	cytosol	46.22	48.31
KRH45566	Soybean	cytosol	39.46	47.87
CDY63551	Canola	cytosol	8.65	47.76
VIT_00s0371g00070.t01	Wine grape	cytosol	46.22	46.85
KRH49728	Soybean	cytosol	27.03	45.66
PGSC0003DMT400024956	Potato	cytosol	14.59	45.0
Zm00001d015618_P001	Maize	extracellular	44.32	44.69
VIT_00s0371g00020.t01	Wine grape	cytosol	6.49	43.64
PGSC0003DMT400041571	Potato	cytosol	15.14	40.29
Solyc05g024320.1.1	Tomato	cytosol	22.97	40.09
VIT_18s0001g01160.t01	Wine grape	mitochondrion	16.49	37.89
Zm00001d020402_P001	Maize	plastid	11.62	35.25
PGSC0003DMT400043759	Potato	cytosol	5.95	24.72
HORVU2Hr1G099350.2	Barley	cytosol, mitochondrion	25.14	23.13
Zm00001d002250_P001	Maize	plastid	47.57	5.62

Protein Annotations

EntrezGene:100191885	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:B4FAJ0	EMBL:BT034128	EMBL:BT040774	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009809
GO:GO:0009987	GO:GO:0016491	GO:GO:0019748	GO:GO:0045551	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM14023.1	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF10	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI00017B60C3	EnsemblPlantsGene:Zm00001d002346	EnsemblPlants:Zm00001d002346_P002	EnsemblPlants:Zm00001d002346_T002	SEG:seg	:

Description

cinnamyl alcohol dehydrogenase1 cinnamyl alcohol dehydrogenase1

Coordinates

chr2:-:10649318..10653316

Molecular Weight (calculated)

39479.7 Da

IEP (calculated)

6.781

GRAVY (calculated)

-0.037

Length

370 amino acids

Sequence
(BLAST)

001: MAPVEAEQHR RRALALAAHD ASGAVSPIRI SRRDTGDDDV AIQILYCGIC HSDLHTIKNE WKNANYPVVP GHEIAGLITE VGKNVKRFNV GDKVGVGCMV
101: NTCQSCESCE GGHENYCSKI IFTYNSHDRD GTVTYGGYSD MVVVNERFVI RFPDGMPLDR GAPLLCAGIT VYNPMKHHGL NEAGKHIGVV GLGGLGHVAV
201: KFAKAFGMRV TVISTSPGKR EEAMETLGAD AFVVSGDANQ MKAAKGTMDG IMNTASASMS MYAYLALLKP QGKMILLGLP EKPLQISAFS LVTGGKTLAG
301: SCMGSIRDTQ EMMDFAAKHG LAADIELIGT EEVNEAMERL AKGEVRYRFV IDIGNTLNAA SLGSSPVPAL

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.