Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX69347 | Canola | cytosol | 88.71 | 88.95 |
CDX75687 | Canola | cytosol | 88.43 | 88.67 |
Bra011798.1-P | Field mustard | cytosol | 88.43 | 88.67 |
VIT_00s0371g00100.t01 | Wine grape | cytosol | 67.22 | 67.4 |
VIT_00s0346g00080.t01 | Wine grape | cytosol | 67.22 | 67.4 |
VIT_18s0122g00450.t01 | Wine grape | cytosol, plastid | 66.94 | 64.63 |
PGSC0003DMT400040518 | Potato | cytosol | 62.81 | 64.04 |
PGSC0003DMT400040520 | Potato | cytosol | 53.99 | 63.84 |
Solyc11g011330.1.1 | Tomato | cytosol | 62.53 | 63.76 |
PGSC0003DMT400013704 | Potato | cytosol | 61.98 | 63.2 |
AT4G37990.1 | Thale cress | cytosol | 61.98 | 62.67 |
Solyc11g011340.1.1 | Tomato | cytosol | 61.98 | 62.67 |
PGSC0003DMT400043757 | Potato | cytosol | 19.83 | 62.07 |
PGSC0003DMT400080827 | Potato | cytosol | 35.81 | 61.32 |
AT4G37980.1 | Thale cress | cytosol | 59.5 | 60.5 |
TraesCS6B01G406300.1 | Wheat | cytosol | 59.5 | 59.18 |
AT4G39330.1 | Thale cress | cytosol | 58.68 | 59.17 |
Zm00001d024314_P001 | Maize | cytosol | 58.4 | 59.05 |
Solyc11g010980.1.1 | Tomato | cytosol | 58.4 | 59.05 |
TraesCS6B01G406000.1 | Wheat | cytosol | 59.23 | 58.74 |
Solyc11g010990.1.1 | Tomato | cytosol | 57.85 | 58.5 |
PGSC0003DMT400041566 | Potato | cytosol | 57.85 | 58.5 |
Solyc11g010960.1.1 | Tomato | cytosol | 57.58 | 58.22 |
TraesCS6D01G353400.1 | Wheat | cytosol | 58.95 | 58.15 |
TraesCS6A01G370100.1 | Wheat | cytosol | 57.02 | 58.15 |
TraesCS6A01G369800.1 | Wheat | cytosol, golgi | 58.4 | 58.08 |
TraesCS6D01G353700.1 | Wheat | cytosol | 58.4 | 57.92 |
TraesCS6D01G353300.1 | Wheat | cytosol | 58.13 | 57.81 |
PGSC0003DMT400041563 | Potato | cytosol | 39.39 | 57.66 |
Os10t0430200-01 | Rice | cytosol | 58.13 | 57.65 |
PGSC0003DMT400024954 | Potato | cytosol | 42.42 | 57.46 |
TraesCS6B01G406200.1 | Wheat | cytosol | 57.85 | 57.38 |
TraesCS7D01G376600.1 | Wheat | cytosol | 57.85 | 57.07 |
PGSC0003DMT400041573 | Potato | cytosol | 50.41 | 57.01 |
TraesCS7A01G380100.1 | Wheat | cytosol | 57.58 | 56.79 |
Os08t0270400-00 | Rice | cytosol | 47.38 | 56.58 |
VIT_00s0346g00090.t01 | Wine grape | cytosol, peroxisome, plastid | 52.62 | 56.51 |
TraesCS7B01G282100.1 | Wheat | cytosol | 57.58 | 56.49 |
AT2G21730.1 | Thale cress | peroxisome | 58.13 | 56.12 |
TraesCS7A01G350500.1 | Wheat | cytosol | 57.3 | 56.06 |
TraesCS7B01G232400.1 | Wheat | cytosol, plastid | 58.13 | 55.97 |
Zm00001d002346_P002 | Maize | plastid | 56.75 | 55.68 |
Solyc04g048960.1.1 | Tomato | endoplasmic reticulum, extracellular | 24.79 | 55.56 |
AT2G21890.1 | Thale cress | cytosol | 57.3 | 55.47 |
Os04t0612700-01 | Rice | cytosol | 57.58 | 55.15 |
TraesCS2A01G424600.1 | Wheat | cytosol | 55.92 | 55.01 |
PGSC0003DMT400024956 | Potato | cytosol | 18.18 | 55.0 |
EER96708 | Sorghum | cytosol | 54.55 | 55.0 |
Os09t0400400-01 | Rice | cytosol | 54.82 | 54.97 |
EER98869 | Sorghum | cytosol | 54.82 | 54.97 |
TraesCS2D01G422400.1 | Wheat | cytosol | 55.65 | 54.89 |
TraesCS2B01G444200.2 | Wheat | cytosol | 55.65 | 54.74 |
OQU80077 | Sorghum | cytosol | 56.2 | 54.69 |
Os09t0399800-01 | Rice | cytosol | 53.99 | 54.6 |
TraesCS5D01G210600.1 | Wheat | cytosol | 53.44 | 54.49 |
TraesCS5A01G205700.1 | Wheat | cytosol | 53.44 | 54.49 |
Zm00001d020401_P001 | Maize | cytosol | 34.44 | 54.11 |
TraesCS5B01G202700.1 | Wheat | cytosol | 52.89 | 53.93 |
OQU82308 | Sorghum | cytosol | 56.2 | 53.68 |
TraesCS7D01G184600.1 | Wheat | cytosol | 29.75 | 53.47 |
Os09t0400300-01 | Rice | plasma membrane | 51.24 | 53.45 |
Zm00001d020400_P001 | Maize | plastid | 53.72 | 53.42 |
TraesCS7D01G184500.1 | Wheat | cytosol | 51.52 | 52.38 |
TraesCS7A01G183000.1 | Wheat | cytosol | 51.24 | 52.1 |
TraesCS7D01G328300.1 | Wheat | cytosol | 57.85 | 51.22 |
TraesCS5B01G209800.2 | Wheat | plastid | 54.27 | 50.64 |
VIT_00s0371g00070.t01 | Wine grape | cytosol | 50.69 | 50.41 |
TraesCS5A01G213900.1 | Wheat | plastid | 53.99 | 50.39 |
Os03t0223200-00 | Rice | cytosol | 52.89 | 50.26 |
TraesCS5D01G218100.2 | Wheat | plastid | 53.72 | 50.26 |
AT4G34230.1 | Thale cress | cytosol | 47.66 | 48.46 |
TraesCS5B01G202800.1 | Wheat | plastid | 56.2 | 48.46 |
TraesCS5D01G210700.1 | Wheat | plastid | 55.37 | 47.74 |
TraesCS5A01G205600.1 | Wheat | plastid | 55.37 | 47.63 |
PGSC0003DMT400041571 | Potato | cytosol | 18.18 | 47.48 |
AT1G72680.1 | Thale cress | cytosol | 45.73 | 46.76 |
OQU89465 | Sorghum | plastid | 53.17 | 46.17 |
AT3G19450.1 | Thale cress | cytosol | 46.28 | 46.03 |
Os09t0400000-00 | Rice | plasma membrane | 54.55 | 45.41 |
HORVU6Hr1G035410.1 | Barley | cytosol | 7.71 | 45.16 |
Zm00001d020402_P001 | Maize | plastid | 11.85 | 35.25 |
Protein Annotations
Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.1 | EntrezGene:829953 | InterPro:ADH_C | InterPro:ADH_N |
InterPro:ADH_Zn_CS | ProteinID:AEE86858.1 | ArrayExpress:AT4G37970 | EnsemblPlantsGene:AT4G37970 | RefSeq:AT4G37970 | TAIR:AT4G37970 |
RefSeq:AT4G37970-TAIR-G | EnsemblPlants:AT4G37970.1 | TAIR:AT4G37970.1 | Symbol:ATCAD6 | EMBL:AY302075 | Unigene:At.31213 |
ProteinID:CAA76418.1 | ProteinID:CAB37537.1 | ProteinID:CAB80462.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009699 | GO:GO:0009809 |
GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019748 | GO:GO:0045551 | GO:GO:0046872 | GO:GO:0052747 |
GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_195510.1 | UniProt:O65621 | PFAM:PF00107 |
PFAM:PF08240 | InterPro:PKS_ER | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009015 | PO:PO:0009046 | PO:PO:0020100 | PO:PO:0020137 |
PO:PO:0025195 | ScanProsite:PS00059 | PANTHER:PTHR42683 | PANTHER:PTHR42683:SF26 | SMART:SM00829 | SUPFAM:SSF50129 |
SUPFAM:SSF51735 | UniParc:UPI00000A3013 | SEG:seg | : | : | : |
Description
CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
Coordinates
chr4:+:17849538..17852256
Molecular Weight (calculated)
39019.7 Da
IEP (calculated)
6.317
GRAVY (calculated)
-0.038
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.