Factsheet for Zm00001d024314_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80077	Sorghum	cytosol	89.42	86.06
HORVU6Hr1G087220.1	Barley	cytosol	82.17	80.38
TraesCS6A01G369800.1	Wheat	cytosol, golgi	81.62	80.27
TraesCS7D01G376600.1	Wheat	cytosol	81.89	79.89
HORVU7Hr1G079380.2	Barley	cytosol	82.73	79.84
TraesCS7A01G350500.1	Wheat	cytosol	82.45	79.78
TraesCS6D01G353300.1	Wheat	cytosol	81.06	79.73
TraesCS7A01G380100.1	Wheat	cytosol	81.34	79.35
TraesCS6B01G406000.1	Wheat	cytosol	80.78	79.23
TraesCS7B01G282100.1	Wheat	cytosol	81.62	79.19
TraesCS6B01G406300.1	Wheat	cytosol	80.5	79.18
TraesCS6D01G353700.1	Wheat	cytosol	79.39	77.87
TraesCS6A01G370100.1	Wheat	cytosol	77.16	77.81
TraesCS7B01G232400.1	Wheat	cytosol, plastid	81.62	77.72
TraesCS6D01G353400.1	Wheat	cytosol	79.39	77.45
Os10t0430200-01	Rice	cytosol	78.83	77.32
TraesCS6B01G406200.1	Wheat	cytosol	78.27	76.78
Os08t0270400-00	Rice	cytosol	64.07	75.66
HORVU1Hr1G007800.1	Barley	cytosol	75.49	73.64
TraesCS7D01G328300.1	Wheat	cytosol	83.01	72.68
Zm00001d002346_P002	Maize	plastid	71.31	69.19
VIT_00s0346g00080.t01	Wine grape	cytosol	66.85	66.3
VIT_00s0371g00100.t01	Wine grape	cytosol	66.57	66.02
VIT_00s0371g00040.t01	Wine grape	cytosol	40.95	65.33
Bra010627.1-P	Field mustard	cytosol	60.72	64.69
CDX90391	Canola	cytosol	63.23	64.31
CDY52519	Canola	cytosol	63.23	64.31
VIT_00s0346g00110.t01	Wine grape	cytosol	64.07	63.89
VIT_00s0371g00050.t01	Wine grape	cytosol	64.07	63.89
KRH74457	Soybean	cytosol	63.79	63.79
CDY52520	Canola	cytosol	46.24	63.12
VIT_00s0615g00010.t01	Wine grape	cytosol	63.23	63.06
KRH74456	Soybean	cytosol	63.51	62.98
AT4G37990.1	Thale cress	cytosol	62.95	62.95
VIT_00s1389g00010.t01	Wine grape	cytosol	62.95	62.78
PGSC0003DMT400080827	Potato	cytosol	36.77	62.26
VIT_00s0615g00020.t01	Wine grape	cytosol	62.4	62.22
VIT_00s0346g00120.t01	Wine grape	cytosol	62.12	61.77
VIT_00s0346g00100.t01	Wine grape	cytosol	61.84	61.5
AT4G37980.1	Thale cress	cytosol	60.45	60.78
PGSC0003DMT400041578	Potato	cytosol	61.0	60.66
KRH07586	Soybean	cytosol	48.75	60.55
Bra010626.1-P	Field mustard	cytosol	58.22	60.4
CDX90392	Canola	cytosol	59.89	60.22
Solyc11g011330.1.1	Tomato	cytosol	59.61	60.11
PGSC0003DMT400040520	Potato	cytosol	51.25	59.93
Solyc11g011340.1.1	Tomato	cytosol	59.89	59.89
KRG99878	Soybean	cytosol	60.17	59.83
VIT_00s0371g00060.t01	Wine grape	cytosol	49.86	59.67
CDX69348	Canola	cytosol	59.05	59.38
Bra011799.1-P	Field mustard	cytosol	59.05	59.38
PGSC0003DMT400040518	Potato	cytosol	58.77	59.27
Bra010625.1-P	Field mustard	cytosol	42.34	59.14
Solyc11g010960.1.1	Tomato	cytosol	59.05	59.05
PGSC0003DMT400041566	Potato	cytosol	59.05	59.05
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	61.84	59.04
CDX75688	Canola	cytosol	58.5	58.82
KRH45510	Soybean	cytosol	48.47	58.78
PGSC0003DMT400043757	Potato	cytosol	18.94	58.62
AT4G37970.1	Thale cress	cytosol	59.05	58.4
PGSC0003DMT400013704	Potato	cytosol	57.66	58.15
Solyc11g010990.1.1	Tomato	cytosol	57.66	57.66
VIT_00s0615g00030.t01	Wine grape	cytosol	63.79	57.54
Solyc11g010980.1.1	Tomato	cytosol	57.38	57.38
CDX69347	Canola	cytosol	57.66	57.18
Zm00001d020400_P001	Maize	plastid	57.38	56.44
PGSC0003DMT400041573	Potato	cytosol	50.42	56.39
Bra011798.1-P	Field mustard	cytosol	56.82	56.35
CDX75687	Canola	cytosol	56.82	56.35
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	25.35	56.17
VIT_00s0218g00010.t01	Wine grape	cytosol	57.38	56.13
PGSC0003DMT400041563	Potato	cytosol	38.72	56.05
Zm00001d004443_P001	Maize	extracellular	56.27	55.96
Zm00001d020401_P001	Maize	cytosol	35.93	55.84
PGSC0003DMT400024956	Potato	cytosol	18.38	55.0
VIT_10s0003g04910.t01	Wine grape	cytosol	55.43	54.82
KRH39488	Soybean	cytosol	55.15	54.4
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	50.14	53.25
KRH39487	Soybean	cytosol	45.68	52.9
VIT_00s0371g00010.t01	Wine grape	cytosol	10.31	52.86
KRH45514	Soybean	cytosol	38.72	52.85
KRH45566	Soybean	cytosol	44.85	52.79
VIT_00s0371g00020.t01	Wine grape	cytosol	8.08	52.73
KRH49728	Soybean	cytosol	31.48	51.6
Zm00001d045043_P001	Maize	cytosol	49.58	50.28
PGSC0003DMT400024954	Potato	cytosol	37.33	50.0
VIT_00s0371g00070.t01	Wine grape	cytosol	49.58	48.77
PGSC0003DMT400041571	Potato	cytosol	18.66	48.2
Zm00001d015618_P001	Maize	extracellular	45.96	44.96
CDY63551	Canola	cytosol	8.36	44.78
Solyc05g024320.1.1	Tomato	cytosol	25.63	43.4
VIT_18s0001g01160.t01	Wine grape	mitochondrion	18.11	40.37
Zm00001d020402_P001	Maize	plastid	10.86	31.97
PGSC0003DMT400043759	Potato	cytosol	7.52	30.34
Zm00001d002250_P001	Maize	plastid	49.3	5.65

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
ProteinID:AQK41014.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:K7TH21
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001890A54	EnsemblPlantsGene:Zm00001d024314
EnsemblPlants:Zm00001d024314_P001	EnsemblPlants:Zm00001d024314_T001	SEG:seg	:	:	:

Description

Putative cinnamyl-alcohol dehydrogenase family protein

Coordinates

chr10:-:63672420..63675196

Molecular Weight (calculated)

38006.9 Da

IEP (calculated)

6.934

GRAVY (calculated)

0.061

Length

359 amino acids

Sequence
(BLAST)

001: MAPTPTHTAA AVALAAHDSS GHLAPLTITR RSTGDDDVAI KILYCGMCHS DLHSIKNEWH NATYPMVPGH EIAGVVTEVG KNVTSFKAGD RVGVGCMVNS
101: CQSCGSCDED FENSCRAVIF TYNSVDRDGT VTYGGYSSSV VVHERFVVRF PDAMPLDRGA PLLCAGITVY SPMKYHGLNV PGKHVGVMGL GGLGHVAVKF
201: AKAFGAKVTV ISTSPGKKQE ALDRLGADAF VVSKDAEEMK AAASTMDGII NTVSANLTLA PYMGLLKPNG KMIMVGLPTK PLEIPPFDLI IGNKTLAGSC
301: IGGMRDTQEM INVAAKHGVT ADIELVAADY VNTAMERLAK ADVRYRFVID IGNTLKNSE

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.